RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 VIPAS39Q9H9C1 493 aa3.81□□□□□ -1.8
CNIH4-201ENST00000366856 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.81□□□□□ -1.8
CNIH4-201ENST00000366856 C2orf42Q9NWW7 574 aa3.81□□□□□ -1.8
CNIH4-201ENST00000366856 LHX3Q9UBR4 397 aa3.81□□□□□ -1.8
CNIH4-201ENST00000366856 CHRNA9Q9UGM1 479 aa3.81□□□□□ -1.8
CNIH4-201ENST00000366856 EXOGQ9Y2C4 368 aaKnown RBP3.81□□□□□ -1.8
CNIH4-201ENST00000366856 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.81□□□□□ -1.8
CNIH4-201ENST00000366856 SPATA31D1Q6ZQQ2 1576 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 RAD54L2Q9Y4B4 1467 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 NEDD4P46934 1319 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 GLTPD2A6NH11 291 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 YJEFN3A6XGL0 299 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 PDXKO00764 312 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 MAPK13O15264 365 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 LRCH4O75427 683 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CSDE1O75534 798 aaKnown RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 PALMO75781 387 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 TBX6O95947 436 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 OPN1MWP04001 364 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 APRTP07741 180 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 HIST1H2AGP0C0S8 130 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 RNF224P0DH78 156 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 OPN1MW2P0DN77 364 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 OPN1MW3P0DN78 364 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CLUP10909 449 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CYP11B1P15538 503 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 RPS2P15880 293 aaKnown RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 DRD5P21918 477 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 GLRA1P23415 457 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 PPP2R1AP30153 589 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 FCGR2BP31994 310 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 MMP12P39900 470 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ALDH3B1P43353 468 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ACADSBP45954 432 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 PAX9P55771 341 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 IRX1P78414 480 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 NME3Q13232 169 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 TMEM132DQ14C87 1099 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 TEAD2Q15562 447 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CCDC6Q16204 474 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 C3AR1Q16581 482 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ZNF74Q16587 644 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 SLC36A3Q495N2 470 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ATAD3BQ5T9A4 648 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 BSPRYQ5W0U4 402 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ZNF772Q68DY9 489 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CENPPQ6IPU0 288 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CDC42EP5Q6NZY7 148 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 VASH2Q86V25 355 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CACUL1Q86Y37 369 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ELMOD1Q8N336 334 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 PARP8Q8N3A8 854 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 STKLD1Q8NE28 680 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 OR5AP2Q8NGF4 316 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 CASP10Q92851 521 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 HIST1H2ACQ93077 130 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ZNF486Q96H40 463 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 PCED1BQ96HM7 432 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 TTC25Q96NG3 672 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 IL12RB2Q99665 862 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 MRPL13Q9BYD1 178 aaKnown RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 GORASP2Q9H8Y8 452 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 SPHK2Q9NRA0 654 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 FARSBQ9NSD9 589 aaKnown RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 SMPD3Q9NY59 655 aaPredicted RBP3.8□□□□□ -1.8
CNIH4-201ENST00000366856 ERVK-18Q9QC07 812 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 FOXJ3Q9UPW0 622 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 PPP1R3CQ9UQK1 317 aa3.8□□□□□ -1.8
CNIH4-201ENST00000366856 KIAA1210Q9ULL0 1709 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 KIF7Q2M1P5 1343 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 ZSCAN5CA6NGD5 496 aaPredicted RBP3.79□□□□□ -1.8
CNIH4-201ENST00000366856 LMO7DNF2Z398 122 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 SLCO1B7G3V0H7 640 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 ARHGEF9O43307 516 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 MTX2O75431 263 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 OR4F21O95013 312 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 NXPH2O95156 264 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 ASNSP08243 561 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 PRKAR1AP10644 381 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 SLC2A2P11168 524 aaPredicted RBP3.79□□□□□ -1.8
CNIH4-201ENST00000366856 CEBPBP17676 345 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 TNNI3P19429 210 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 GLRA2P23416 452 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 TMOD1P28289 359 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 OR3A2P47893 321 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 NPY2RP49146 381 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 BACE1P56817 501 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 IL24Q13007 206 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 GPM6BQ13491 265 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 CLPPQ16740 277 aaPredicted RBP3.79□□□□□ -1.8
CNIH4-201ENST00000366856 ZC2HC1BQ5TFG8 222 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 NCR3LG1Q68D85 454 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 ZDHHC21Q8IVQ6 265 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 GCNT2Q8N0V5 402 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 LSMEM2Q8N112 164 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 COLGALT1Q8NBJ5 622 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 OR6S1Q8NH40 331 aa3.79□□□□□ -1.8
CNIH4-201ENST00000366856 AZIN2Q96A70 460 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms