RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 JPH3Q8WXH2 748 aaPredicted RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 ECHDC3Q96DC8 303 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 SGTBQ96EQ0 304 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 A0A075B6Q4 140 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 ABCB7O75027 752 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 CLRN1P58418 232 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 NFATC4Q14934 902 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 RNASE12Q5GAN4 147 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 EGFLAMQ63HQ2 1017 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 PDSS2Q86YH6 399 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 HORMAD2Q8N7B1 307 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 ZSCAN4Q8NAM6 433 aaPredicted RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 SPPL3Q8TCT6 385 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 MRPL38Q96DV4 380 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 EVA1AQ9H8M9 152 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 A6NCN8 305 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 VSTM2BA6NLU5 285 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 TEX46H3BTG2 121 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 RTCAO00442 366 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 PROM1O43490 865 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 IL33O95760 270 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 APOC1P02654 83 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 IL1RNP18510 177 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 SHC2P98077 582 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 ERI1Q8IV48 349 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 CHERPQ8IWX8 916 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 PIANPQ8IYJ0 282 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 CAPSLQ8WWF8 208 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 LHX3Q9UBR4 397 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 CDH10Q9Y6N8 788 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 SCO2O43819 266 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 SOX14O95416 240 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 P04436 131 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 CD38P28907 300 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 CDH24Q86UP0 819 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 ZNF101Q8IZC7 436 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 HIDE1A8MVS5 230 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 HTRA2O43464 458 aaPredicted RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 CCNKO75909 580 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 DHRS4L1P0CG22 281 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 AZGP1P25311 298 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 ERVFC1P60507 584 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 PPP1R8Q12972 351 aaKnown RBP12.85□□□□□ -0.35
LDB3-202ENST00000361373 ALDH16A1Q8IZ83 802 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 HTRA1Q92743 480 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 NKD1Q969G9 470 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 HSPE1-MOB4S4R3N1 261 aa12.85□□□□□ -0.35
LDB3-202ENST00000361373 CER1O95813 267 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 PRLP01236 227 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 S1PR1P21453 382 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 OR1E2P47887 323 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 NUDT6P53370 316 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 SIM1P81133 766 aaPredicted RBP12.84□□□□□ -0.35
LDB3-202ENST00000361373 ZNF227Q86WZ6 799 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 PEX11GQ96HA9 241 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 MS4A4EQ96PG1 132 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 BRD7Q9NPI1 651 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 LINC01553A4QN01 128 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 KDM4BO94953 1096 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 CHRM5P08912 532 aaPredicted RBP12.84□□□□□ -0.35
LDB3-202ENST00000361373 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 ARHGAP11AQ6P4F7 1023 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 CLIP4Q8N3C7 705 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 OR2L3Q8NG85 312 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 NSMAFQ92636 917 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 NT5C3BQ969T7 300 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 B3GNT4Q9C0J1 378 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 GXYLT2A0PJZ3 443 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 TTLL8A6PVC2 850 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 ACOT7O00154 380 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 VILLO15195 856 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 EN2P19622 333 aaPredicted RBP12.84□□□□□ -0.35
LDB3-202ENST00000361373 GALNTL5Q7Z4T8 443 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 TEX26Q8N6G2 289 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 DENND6BQ8NEG7 585 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 GSTO2Q9H4Y5 243 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 POT1Q9NUX5 634 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 ITGB4P16144 1822 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 HTR3EA5X5Y0 456 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 FAM172BPA6NC97 362 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 GJE1A6NN92 205 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 CACNG3O60359 315 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 IRF4Q15306 451 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 NR0B2Q15466 257 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 SWI5Q1ZZU3 235 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 PTERQ96BW5 349 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 ZNF221Q9UK13 617 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 ACTL7AQ9Y615 435 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 MAST2Q6P0Q8 1798 aa12.84□□□□□ -0.35
LDB3-202ENST00000361373 TEX13CA0A0J9YWL9 993 aa12.83□□□□□ -0.35
LDB3-202ENST00000361373 SLC22A31A6NKX4 558 aa12.83□□□□□ -0.35
LDB3-202ENST00000361373 RASAL1O95294 804 aa12.83□□□□□ -0.35
LDB3-202ENST00000361373 RLN2P04090 185 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms