RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CITO14578 2027 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 MYO18AQ92614 2054 aaKnown RBP6.7□□□□□ -1.34
RAB5B-201ENST00000360299 DPPA5A6NC42 116 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 BTN3A3O00478 584 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 TOR1BO14657 336 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CSO75390 466 aaKnown RBP6.7□□□□□ -1.34
RAB5B-201ENST00000360299 IGLV3-27P01718 113 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 ACVR2AP27037 513 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 OMPP47874 163 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 RAB25P57735 213 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CTBSQ01459 385 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 RBPJQ06330 500 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 FIGLAQ6QHK4 219 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 ARHGAP22Q7Z5H3 698 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CLEC14AQ86T13 490 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 ZNF440Q8IYI8 595 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 IZUMO1Q8IYV9 350 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 LSMEM2Q8N112 164 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CSNK1A1LQ8N752 337 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 POC5Q8NA72 575 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 SORT1Q99523 831 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 COMMD4Q9H0A8 199 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 MCM3APO60318 1980 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 PATE3B3GLJ2 98 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 FAAHO00519 579 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CLEC3AO75596 197 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 OXSR1O95747 527 aaPredicted RBP6.7□□□□□ -1.34
RAB5B-201ENST00000360299 OPN1SWP03999 348 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 LINGO3P0C6S8 592 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CDKN1CP49918 316 aaPredicted RBP6.7□□□□□ -1.34
RAB5B-201ENST00000360299 SGSHP51688 502 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CDK3Q00526 305 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 CEACAM7Q14002 265 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 PYDC2Q56P42 97 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 PIGGQ5H8A4 983 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 C19orf48Q6RUI8 117 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 KRT74Q7RTS7 529 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 KIAA1958Q8N8K9 716 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 MFSD2AQ8NA29 543 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 HS6ST2Q96MM7 605 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 F2RL3Q96RI0 385 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 MKRN2Q9H000 416 aaKnown RBP6.7□□□□□ -1.34
RAB5B-201ENST00000360299 C11orf16Q9NQ32 467 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 NKX1-2Q9UD57 310 aaPredicted RBP6.7□□□□□ -1.34
RAB5B-201ENST00000360299 EMCNQ9ULC0 261 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 N6AMT1Q9Y5N5 214 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 ST14Q9Y5Y6 855 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 HSPE1-MOB4S4R3N1 261 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 PLXNB2O15031 1838 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 MAP1BP46821 2468 aaKnown RBP6.7□□□□□ -1.34
RAB5B-201ENST00000360299 EVPLQ92817 2033 aa6.7□□□□□ -1.34
RAB5B-201ENST00000360299 DAPL1A0PJW8 107 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 H0Y8X5 98 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 PDCD5O14737 125 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 GBAP04062 536 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 PORP16435 677 aaPredicted RBP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 ADPRHP54922 357 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 MEF2AQ02078 507 aaPredicted RBP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 VEZF1Q14119 521 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 GANABQ14697 944 aaKnown RBP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 KCTD21Q4G0X4 260 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 SLC30A6Q6NXT4 461 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 LETMD1Q6P1Q0 360 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 LARP4Q71RC2 724 aaKnown RBP eCLIP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 COMMD6Q7Z4G1 85 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 C6orf120Q7Z4R8 191 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 NAXDQ8IW45 347 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 CCDC116Q8IYX3 515 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 KLHL36Q8N4N3 616 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 ANKFN1Q8N957 763 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 DENND6BQ8NEG7 585 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 NUP43Q8NFH3 380 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 GNPDA2Q8TDQ7 276 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 CCDC74AQ96AQ1 378 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 HDAC8Q9BY41 377 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 POLR2J2Q9GZM3 115 aaKnown RBP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 SEC14L4Q9UDX3 406 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 LOC285556D6RIA3 1793 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 UBE2QL1A1L167 161 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 CCDC182A6NF36 153 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 OR52A4PA6NMU1 304 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 PDLIM1O00151 329 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 GPR37L1O60883 481 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 PPM1BO75688 479 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 RHCEP18577 417 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 QPRTQ15274 297 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 GGTA1PQ4G0N0 100 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 CXorf57Q6NSI4 855 aaKnown RBP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 SHQ1Q6PI26 577 aaKnown RBP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 USP43Q70EL4 1123 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 KBTBD2Q8IY47 623 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 KLHDC8AQ8IYD2 350 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 C16orf78Q8WTQ4 265 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 TMEM234Q8WY98 164 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 HDAC2Q92769 488 aaKnown RBP6.69□□□□□ -1.34
RAB5B-201ENST00000360299 IL17FQ96PD4 163 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 MCHR1Q99705 422 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 ZFYVE21Q9BQ24 234 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 DEFB126Q9BYW3 111 aa6.69□□□□□ -1.34
RAB5B-201ENST00000360299 TRIM2Q9C040 744 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms