RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 FN3KRPQ9HA64 309 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TMEM45AQ9NWC5 275 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ZNF446Q9NWS9 450 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 GFOD1Q9NXC2 390 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 SCP2D1Q9UJQ7 156 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 TCRBV7S2A1N4TA0A589 114 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 FEZF1A0PJY2 475 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 SLC7A4O43246 635 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 B3GALNT1O75752 331 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 NDST3O95803 873 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 EDN1P05305 212 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 NMBRP28336 390 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 PIK3CBP42338 1070 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 IDH3GP51553 393 aaPredicted RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 PLCXD3Q63HM9 321 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 STEAP4Q687X5 459 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ZNF585AQ6P3V2 769 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 CMIPQ8IY22 773 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ESX1Q8N693 406 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 OR51Q1Q8NH59 317 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TSPAN18Q96SJ8 248 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ZNF559Q9BR84 538 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 SMIM28A0A1B0GU29 152 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 HMX3A6NHT5 357 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ZNF705GA8MUZ8 300 aaPredicted RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 YIF1AO95070 293 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 CCNHP51946 323 aaPredicted RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 POU6F2P78424 691 aaPredicted RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 ACSBG2Q5FVE4 666 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ADGRF1Q5T601 910 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TMPRSS11FQ6ZWK6 438 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 SCAMP5Q8TAC9 235 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 SLC2A12Q8TD20 617 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 DDX1Q92499 740 aaKnown RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 VCPIP1Q96JH7 1222 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 KREMEN1Q96MU8 473 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 P2RY13Q9BPV8 354 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 NMUR2Q9GZQ4 415 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 GSTO2Q9H4Y5 243 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ACTL8Q9H568 366 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 MGAT4BQ9UQ53 548 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 RCBTB2O95199 551 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ADH1BP00325 375 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 CDH1P12830 882 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ENGP17813 658 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 GNAZP19086 355 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 PTDSS1P48651 473 aaKnown RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 TGM4P49221 684 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 NAA20P61599 178 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 DEFB133Q30KQ1 61 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 FCRLBQ6BAA4 426 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 THAP4Q8WY91 577 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 SLAMF9Q96A28 289 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TWNKQ96RR1 684 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 VSTM2BA6NLU5 285 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TGFB1I1O43294 461 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ITGB8P26012 769 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 NR4A2P43354 598 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 AIF1P55008 147 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 BIDP55957 195 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 DEFB110Q30KQ9 67 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TUBA3EQ6PEY2 450 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ABHD15Q6UXT9 468 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 CEACAM20Q6UY09 585 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ESPNLQ6ZVH7 1005 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 FAM71AQ8IYT1 594 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 AQP11Q8NBQ7 271 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 FAM122AQ96E09 287 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 SLC17A7Q9P2U7 560 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 MYH8P13535 1937 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 TCHHQ07283 1943 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 CDRT1O95170 752 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 ACOT11Q8WXI4 607 aaPredicted RBP9.36□□□□□ -0.91
CHD3-202ENST00000358181 CMTM7Q96FZ5 175 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 ZNF845Q96IR2 970 aaPredicted RBP9.36□□□□□ -0.91
CHD3-202ENST00000358181 PDZD7Q9H5P4 517 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 ERVK13-1Q9NX77 482 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 CRTAPO75718 401 aaPredicted RBP9.36□□□□□ -0.91
CHD3-202ENST00000358181 POP7O75817 140 aaKnown RBP9.36□□□□□ -0.91
CHD3-202ENST00000358181 CAV2P51636 162 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 NUDT6P53370 316 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 RAB5BP61020 215 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 SLC35A2P78381 396 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 HTRA3P83110 453 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 GBE1Q04446 702 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 COL28A1Q2UY09 1125 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 IL34Q6ZMJ4 242 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 OR2T34Q8NGX1 318 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 OR2T3Q8NH03 318 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 WFIKKN2Q8TEU8 576 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 HAS2Q92819 552 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 IRF7Q92985 503 aa9.36□□□□□ -0.91
CHD3-202ENST00000358181 SAMD11Q96NU1 681 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms