RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 RPS3P23396 243 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 SLC36A4Q6YBV0 504 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 GNPDA2Q8TDQ7 276 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 SMPDL3AQ92484 453 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 GALPQ9UBC7 116 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 RNF11Q9Y3C5 154 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 TTLL8A6PVC2 850 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 H3BNX3 289 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 FRKP42685 505 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 TLE3Q04726 772 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 LY6G5CQ5SRR4 150 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 FKBP1CQ5VVH2 108 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 LIPKQ5VXJ0 399 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CILP2Q8IUL8 1156 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 OR51T1Q8NGJ9 327 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 DAZAP1Q96EP5 407 aaKnown RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 C19orf12Q9NSK7 152 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 SQORQ9Y6N5 450 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 TNS2Q63HR2 1409 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 EEF1E1O43324 174 aaKnown RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 DBHP09172 617 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 IDH3GP51553 393 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 HTRA3P83110 453 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 C9orf152Q5JTZ5 239 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 AKR1C8PQ5T2L2 129 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 MRPL41Q8IXM3 137 aaKnown RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 TMIEQ8NEW7 156 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 A0A1W2PPW3 197 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 IMPA2O14732 288 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CYB5BO43169 146 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 DHCR24Q15392 516 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 C6orf120Q7Z4R8 191 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 NANOS1Q8WY41 292 aaKnown RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 ZC3HAV1LQ96H79 300 aaKnown RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 OXSMQ9NWU1 459 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 TCRBV7S2A1N4TA0A589 114 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CELP19835 753 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 DCST2Q5T1A1 773 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 BORAQ6PGQ7 559 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 MRPL21Q7Z2W9 205 aaKnown RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 SYT4Q9H2B2 425 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CNTN6Q9UQ52 1028 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 ZNF541Q9H0D2 1346 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CAPN5O15484 640 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 AP1G1O43747 822 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 GSTM3P21266 225 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CD79BP40259 229 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CAMLGP49069 296 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 TLE1Q04724 770 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 ZNF674Q2M3X9 581 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 PLEKHN1Q494U1 663 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-201ENST00000356083 DEFB134Q4QY38 66 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 FAM180BQ6P0A1 224 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 OR4K15Q8NH41 348 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 P2RY13Q9BPV8 354 aa16.55■□□□□ 0.24
COL27A1-201ENST00000356083 ANXA8P13928 327 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 OR2T5Q6IEZ7 315 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 ZNF695Q8IW36 515 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 SYT14Q8NB59 555 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 OR2T29Q8NH02 315 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 TXN2Q99757 166 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 KLHL13Q9P2N7 655 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 CREBL2O60519 120 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 FESP07332 822 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 EEF1A1P68104 462 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 HNF4GQ14541 408 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 SF3A2Q15428 464 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 C9orf135Q5VTT2 229 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM71Q6P5X7 295 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 OR52E2Q8NGJ4 325 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 ZNF675Q8TD23 568 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 MCHR1Q99705 422 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 CPEB1Q9BZB8 566 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 EMC3Q9P0I2 261 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 PCDHGB6Q9Y5F9 930 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 CDH10Q9Y6N8 788 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 GTF3C1Q12789 2109 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 EEF1E1-BLOC1S5C9J1V9 151 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 IRAK2O43187 625 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 EDF1O60869 148 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 IFNA17P01571 189 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 GATMP50440 423 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 SMAD2Q15796 467 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 OR2T27Q8NH04 317 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 CENPBD1B2RD01 187 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 ARAFP10398 606 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 IL32P24001 234 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 ARL16Q0P5N6 197 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 OR1A2Q9Y585 309 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 IGLON5A6NGN9 336 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 LATO43561 262 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 RAD1O60671 282 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 ZNF43P17038 809 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 TNFRSF8P28908 595 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 RORAP35398 523 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 UGT2B10P36537 528 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 DAOAP59103 153 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms