RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 ITGAMP11215 1152 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 EFNA1P20827 205 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 SEC24CP53992 1094 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 AIMP2Q13155 320 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 LTB4RQ15722 352 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 MPEG1Q2M385 716 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 PLAG1Q6DJT9 500 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 SPATA19Q7Z5L4 167 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 APLFQ8IW19 511 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 GALNT16Q8N428 558 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 RIT1Q92963 219 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 PPCDCQ96CD2 204 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 DDAH2O95865 285 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 ITGB2P05107 769 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 CT62P0C5K7 136 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 FAM87AP0C7U9 286 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 COX7A2P14406 83 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 CSNK2A2P19784 350 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 NT5EP21589 574 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 POLE2P56282 527 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 PDE7AQ13946 482 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 LINC00303Q3SY05 128 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 KBTBD2Q8IY47 623 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 LRRC25Q8N386 305 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 SLC2A12Q8TD20 617 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 NCLNQ969V3 563 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 TEX37Q96LM6 180 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 CNPPD1Q9BV87 410 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 SLAMF7Q9NQ25 335 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 AIG1Q9NVV5 245 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 ENTPD4Q9Y227 616 aa16.68■□□□□ 0.26
PDLIM7-202ENST00000355841 CACNA1GO43497 2377 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 ANKRD28O15084 1053 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 UBDO15205 165 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 LAMP1P11279 417 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 HPCAL1P37235 193 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 CLDN8P56748 225 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 UFM1P61960 85 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 GNGT1P63211 74 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF267Q14586 743 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 EXT1Q16394 746 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 RIMKLAQ8IXN7 391 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 SIRT6Q8N6T7 355 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 APCDD1LQ8NCL9 501 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 B3GNT7Q8NFL0 401 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 FDCSPQ8NFU4 85 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 OR9A2Q8NGT5 310 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 OR14A16Q8NHC5 309 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 SUN3Q8TAQ9 357 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 DAZLQ92904 295 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 SENP5Q96HI0 755 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 BBS4Q96RK4 519 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 DPY30Q9C005 99 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 ANKRA2Q9H9E1 313 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 CXorf21Q9HAI6 301 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 GIMAP4Q9NUV9 329 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 TAS2R7Q9NYW3 318 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 GPR45Q9Y5Y3 372 aa16.67■□□□□ 0.26
PDLIM7-202ENST00000355841 CROCCQ5TZA2 2017 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 A8MUI8 341 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 SERPINA7P05543 415 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 TROVE2P10155 538 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 PRPS1L1P21108 318 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 LSP1P33241 339 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 ST13P50502 369 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 GPR143P51810 404 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 MRPS35P82673 323 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 PGS1Q32NB8 556 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 FCRLBQ6BAA4 426 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 FAM111BQ6SJ93 734 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 SIMC1Q8NDZ2 872 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 BRIX1Q8TDN6 353 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 TTC9Q92623 222 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 CHMP6Q96FZ7 201 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 RILPQ96NA2 401 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 ARHGAP9Q9BRR9 750 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 NUDT9Q9BW91 350 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 TMEM120AQ9BXJ8 343 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 BRINP2Q9C0B6 783 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 FAM107BQ9H098 131 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 GPR83Q9NYM4 423 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 ATP6V1HQ9UI12 483 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF223Q9UK11 482 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 ERVK-19Q9WJR5 959 aa16.66■□□□□ 0.26
PDLIM7-202ENST00000355841 MYO1GB0I1T2 1018 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 ATP1B1P05026 303 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 ICAM2P13598 275 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 SSTR4P31391 388 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 SOX18P35713 384 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 NCBP2P52298 156 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■□□□□ 8.3
PDLIM7-202ENST00000355841 BIKQ13323 160 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 RPS6KA2Q15349 733 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 CPTPQ5TA50 214 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 B3GNTL1Q67FW5 361 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF551Q7Z340 670 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 GALNT12Q8IXK2 581 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 M1APQ8TC57 530 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF721Q8TF20 911 aa16.65■□□□□ 0.26
PDLIM7-202ENST00000355841 THAP3Q8WTV1 239 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms