RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 VTCN1Q7Z7D3 282 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 LRRC25Q8N386 305 aaPredicted RBP16.21■□□□□ 0.19
VPS13B-201ENST00000355155 DHRSXQ8N5I4 330 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 OR4C15Q8NGM1 316 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 BBS10Q8TAM1 723 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 MUTYHQ9UIF7 546 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 TMEFF2Q9UIK5 374 aaPredicted RBP16.21■□□□□ 0.19
VPS13B-201ENST00000355155 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 ARRDC5A6NEK1 342 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 WASHC1A8K0Z3 465 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 STATHP02808 62 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 THRBP10828 461 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 ETS2P15036 469 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 ITGA2P17301 1181 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 SOX18P35713 384 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 RPS6KA3P51812 740 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 PRR5P85299 388 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 BNC1Q01954 994 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 FAHD1Q6P587 224 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 MCATQ8IVS2 390 aaKnown RBP16.21■□□□□ 0.19
VPS13B-201ENST00000355155 TMEFF1Q8IYR6 380 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 OR2L13Q8N349 312 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 ARL10Q8N8L6 244 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 OR4K14Q8NGD5 310 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 DHRS1Q96LJ7 313 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 KCND3Q9UK17 655 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 MRPS2Q9Y399 296 aaKnown RBP16.21■□□□□ 0.19
VPS13B-201ENST00000355155 MN1Q10571 1320 aaPredicted RBP16.2■□□□□ 0.18
VPS13B-201ENST00000355155 PRAMEF27A3QJZ7 478 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 H3BMH7 237 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 SLC16A6O15403 523 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 PRKRAO75569 313 aaKnown RBP16.2■□□□□ 0.18
VPS13B-201ENST00000355155 IGLV3-21P80748 117 aaPredicted RBP16.2■□□□□ 0.18
VPS13B-201ENST00000355155 SPIDRQ14159 915 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 HEPHL1Q6MZM0 1159 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 SDCCAG3Q96C92 435 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 SLC38A3Q99624 504 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 TMEM121BQ9BXQ6 578 aaPredicted RBP16.2■□□□□ 0.18
VPS13B-201ENST00000355155 C3orf14Q9HBI5 128 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 NDUFAF4Q9P032 175 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 DOLKQ9UPQ8 538 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 SNX8Q9Y5X2 465 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 PGM3O95394 542 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 MATN1P21941 496 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 MAPK10P53779 464 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 IL18R1Q13478 541 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 KCTD21Q4G0X4 260 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 ZNF628Q5EBL2 1059 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 KDM4DQ6B0I6 523 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 ZCCHC12Q6PEW1 402 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 FBLIM1Q8WUP2 373 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 TMEM19Q96HH6 336 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 MBOAT4Q96T53 435 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 OR51I1Q9H343 314 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 PLCL2Q9UPR0 1127 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 SPACA6W5XKT8 324 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 THADAQ6YHU6 1953 aa16.2■□□□□ 0.18
VPS13B-201ENST00000355155 PRAMEF25A6NGN4 478 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 M0QX08 132 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 UBTFL6P0CB48 400 aaPredicted RBP16.19■□□□□ 0.18
VPS13B-201ENST00000355155 XCR1P46094 333 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 CSNK1EP49674 416 aaKnown RBP16.19■□□□□ 0.18
VPS13B-201ENST00000355155 SPDYE7PQ495Y7 208 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 GAB3Q8WWW8 586 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 ZNF300Q96RE9 604 aaPredicted RBP16.19■□□□□ 0.18
VPS13B-201ENST00000355155 MIR1-1HGQ9H1L0 117 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 ZCCHC3Q9NUD5 404 aaKnown RBP16.19■□□□□ 0.18
VPS13B-201ENST00000355155 PCDHGB3Q9Y5G1 929 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 H3BNH8 94 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 AGR2O95994 175 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 CDH3P22223 829 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 SKP1P63208 163 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 KCNC4Q03721 635 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 DEFB134Q4QY38 66 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 MAGEE2Q8TD90 523 aaPredicted RBP16.19■□□□□ 0.18
VPS13B-201ENST00000355155 ZDHHC12Q96GR4 267 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 CNBD2Q96M20 576 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 CSF3RQ99062 836 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 UCKL1Q9NWZ5 548 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 ACAD8Q9UKU7 415 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 LIPT1Q9Y234 373 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 AK5Q9Y6K8 562 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 RNF215Q9Y6U7 377 aa16.19■□□□□ 0.18
VPS13B-201ENST00000355155 ADAMDEC1O15204 470 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 PRAMEF10O60809 474 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 CPMP14384 443 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 TYRP1P17643 537 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 KCNJ5P48544 419 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 GPLD1P80108 840 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 FUT5Q11128 374 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 TCTE1Q5JU00 501 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 PRSS42Q7Z5A4 293 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 KMT5CQ86Y97 462 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 CCDC116Q8IYX3 515 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 SLC25A45Q8N413 288 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 ZC3H10Q96K80 434 aaKnown RBP16.18■□□□□ 0.18
VPS13B-201ENST00000355155 MRPS26Q9BYN8 205 aaKnown RBP16.18■□□□□ 0.18
VPS13B-201ENST00000355155 TUBA8Q9NY65 449 aaPredicted RBP16.18■□□□□ 0.18
VPS13B-201ENST00000355155 SUSD2Q9UGT4 822 aa16.18■□□□□ 0.18
VPS13B-201ENST00000355155 PILRBQ9UKJ0 227 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms