RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 IGHG3P01860 377 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ESR1P03372 595 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 C8BP07358 591 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 FAM153BP0C7A2 387 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ZNF888P0CJ79 500 aaPredicted RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 CDH1P12830 882 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 GABRA1P14867 456 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ALOX12P18054 663 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 CD53P19397 219 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 NMBRP28336 390 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 FDFT1P37268 417 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 HNF4AP41235 474 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 RPS3AP61247 264 aaKnown RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 MAGOHP61326 146 aaKnown RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 DR1Q01658 176 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 UAP1Q16222 522 aaPredicted RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 ZNF750Q32MQ0 723 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 TTLL9Q3SXZ7 439 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 FAM153CQ494X1 144 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ANKDD1AQ495B1 522 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 SIGIRRQ6IA17 410 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 CES3Q6UWW8 571 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 FAM47EQ6ZV65 393 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 UBE2R2Q712K3 238 aaPredicted RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 GPALPP1Q8IXQ4 340 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 LRRC56Q8IYG6 542 aaPredicted RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 PRELID2Q8N945 189 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 MFSD9Q8NBP5 474 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 APCDD1LQ8NCL9 501 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 SIMC1Q8NDZ2 872 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ANGPTL6Q8NI99 470 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ALG3Q92685 438 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 PEX13Q92968 403 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ABTB1Q969K4 478 aaPredicted RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 MAGOHBQ96A72 148 aaKnown RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 KIAA1191Q96A73 305 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 VMP1Q96GC9 406 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 ELAC2Q9BQ52 826 aaKnown RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 FAM173AQ9BQD7 235 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 TXLNGYQ9BZA5 131 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 PLEKHF2Q9H8W4 249 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 IL1RL2Q9HB29 575 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 RAB6BQ9NRW1 208 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 INTS9Q9NV88 658 aaKnown RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 FN1P02751 2386 aaKnown RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 HRNRQ86YZ3 2850 aaPredicted RBP10.36□□□□□ -0.75
RTN3-204ENST00000354497 SCN3AQ9NY46 2000 aa10.36□□□□□ -0.75
RTN3-204ENST00000354497 TRGV5A0A0B4J1U4 118 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 LOC105371267A0A1B0GV96 52 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 RNF212BA8MTL3 300 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 WWP2O00308 870 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 PRKNO60260 465 aaPredicted RBP10.35□□□□□ -0.75
RTN3-204ENST00000354497 SMPD2O60906 423 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 AVILO75366 819 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 ZFAND5O76080 213 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 GLSO94925 669 aaPredicted RBP10.35□□□□□ -0.75
RTN3-204ENST00000354497 VAPBO95292 243 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 APRTP07741 180 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 EPXP11678 715 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 SOX3P41225 446 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 DNASE1L1P49184 302 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 WNT3P56703 355 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 RAB8AP61006 207 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 SLC10A1Q14973 349 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 FAM209AQ5JX71 171 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 NIPAL1Q6NVV3 410 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 KIAA0408Q6ZU52 694 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 ABHD13Q7L211 337 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 PRUNE1Q86TP1 453 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 ARMC10Q8N2F6 343 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 OR7G1Q8NGA0 311 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 ATG4AQ8WYN0 398 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 LRGUKQ96M69 825 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 RBM38Q9H0Z9 239 aaKnown RBP10.35□□□□□ -0.75
RTN3-204ENST00000354497 ARMC1Q9NVT9 282 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 GID8Q9NWU2 228 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 MKS1Q9NXB0 559 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 KLHL14Q9P2G3 628 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 SPRR3Q9UBC9 169 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 ZNF223Q9UK11 482 aaPredicted RBP10.35□□□□□ -0.75
RTN3-204ENST00000354497 PCDHA13Q9Y5I0 950 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 COMMD10Q9Y6G5 202 aa10.35□□□□□ -0.75
RTN3-204ENST00000354497 A0A1B0GVC2 190 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 TRIM64CA6NLI5 447 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 CCDC188H7C350 402 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 RGS13O14921 159 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 DCTN3O75935 186 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 P04436 131 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 F7P08709 466 aaPredicted RBP10.34□□□□□ -0.75
RTN3-204ENST00000354497 MPC1LP0DKB6 136 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 RNH1P13489 461 aaKnown RBP10.34□□□□□ -0.75
RTN3-204ENST00000354497 CHN1P15882 459 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 CNR1P21554 472 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 ECHS1P30084 290 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 PPP2R1BP30154 601 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 BCAP31P51572 246 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 HNRNPFP52597 415 aaKnown RBP10.34□□□□□ -0.75
RTN3-204ENST00000354497 RGS1Q08116 209 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms