RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 HCAR2Q8TDS4 363 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 METTL8Q9H825 291 aaKnown RBP15.29■□□□□ 0.04
PTPN11-201ENST00000351677 HCFC1R1Q9NWW0 138 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 SPARCP09486 303 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 MAN2A2P49641 1150 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 NCS1P62166 190 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 CHD4Q14839 1912 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.29■□□□□ 0.04
PTPN11-201ENST00000351677 OR52N2Q8NGI0 321 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 OR8S1Q8NH09 359 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 ECHDC3Q96DC8 303 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 PHOX2BQ99453 314 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 IL23AQ9NPF7 189 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 ZSCAN5BA6NJL1 495 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 PENKP01210 267 aaPredicted RBP15.29■□□□□ 0.04
PTPN11-201ENST00000351677 PFKLP17858 780 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPN11-201ENST00000351677 GSTM4Q03013 218 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 OR13J1Q8NGT2 312 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 OR6N1Q8NGY5 312 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 LHPPQ9H008 270 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 ARMC1Q9NVT9 282 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 DRGXA6NNA5 263 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 TRAPPC6AO75865 159 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF41P51814 821 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 SIM1P81133 766 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 TMEM17Q86X19 198 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 KLHDC8AQ8IYD2 350 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 INO80EQ8NBZ0 244 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF431Q8TF32 576 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 CXCL16Q9H2A7 254 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 SLC6A15Q9H2J7 730 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 KIF13AQ9H1H9 1805 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 KANTRA0A1W2PQU2 76 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 RLN2P04090 185 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 HOXD8P13378 290 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 DRD2P14416 443 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 GSTM2P28161 218 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 ACVR1BP36896 505 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 CEACAM19Q7Z692 300 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 KLBQ86Z14 1044 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 CSNK1A1LQ8N752 337 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 OR5AR1Q8NGP9 310 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 TGM7Q96PF1 710 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 DZANK1Q9NVP4 752 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 METTL21EPA6NDL7 271 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 ITIH1P19827 911 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 HRH2P25021 359 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 MAPK3P27361 379 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 ARRB1P49407 418 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 CLCN2P51788 898 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF140P52738 457 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 TAS2R38P59533 333 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 RGNQ15493 299 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 HS3ST5Q8IZT8 346 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 MEMO1Q9Y316 297 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 SCO2O43819 266 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 RPS17P08708 135 aaKnown RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 GRPRP30550 384 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 GABARAPL2P60520 117 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 RUNX3Q13761 415 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 UGT3A2Q3SY77 523 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 RAB41Q5JT25 222 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 THAP3Q8WTV1 239 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 C15orf40Q8WUR7 153 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 FAM46AQ96IP4 442 aaKnown RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 GPR174Q9BXC1 333 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 C20orf27Q9GZN8 174 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 PLEKHA6Q9Y2H5 1048 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 DNAJB5O75953 348 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 EIF4HQ15056 248 aaKnown RBP15.28■□□□□ 0.04
PTPN11-201ENST00000351677 C1orf94Q6P1W5 598 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 GPAT4Q86UL3 456 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 SLC30A3Q99726 388 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 G6PC3Q9BUM1 346 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 VAPAQ9P0L0 249 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 IL20RAQ9UHF4 553 aa15.28■□□□□ 0.04
PTPN11-201ENST00000351677 WASH4PA8MWX3 477 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 CSTBP04080 98 aaKnown RBP15.27■□□□□ 0.04
PTPN11-201ENST00000351677 KLK3P07288 261 aaPredicted RBP15.27■□□□□ 0.04
PTPN11-201ENST00000351677 HEXBP07686 556 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 CD97P48960 835 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 RPS15AP62244 130 aaKnown RBP15.27■□□□□ 0.04
PTPN11-201ENST00000351677 LSAMPQ13449 338 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 CTC1Q2NKJ3 1217 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 C6orf183Q5T699 404 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 SHFQ7M4L6 423 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 TRIM73Q86UV7 250 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 CMKLR1Q99788 373 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 ERVK13-1Q9NX77 482 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 HCSTQ9UBK5 93 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 PRSS21Q9Y6M0 314 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 CTSAP10619 480 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 CRYZQ08257 329 aaKnown RBP15.27■□□□□ 0.04
PTPN11-201ENST00000351677 ELOCQ15369 112 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 TBRG1Q3YBR2 411 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 PKDCCQ504Y2 493 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 LARP4Q71RC2 724 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTPN11-201ENST00000351677 IQCF1Q8N6M8 205 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 OR9Q2Q8NGE9 314 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms