RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ZNF852Q6ZMS4 543 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 VRK3Q8IV63 474 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 TM9SF4Q92544 642 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 GPATCH2Q9NW75 528 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 NCKAP1Q9Y2A7 1128 aa17.73■□□□□ 0.43
SCARF1-202ENST00000348987 PRAMEF33A0A0G2JMD5 474 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 RPS10-NUDT3A0A1W2PQS6 291 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 PCP4L1A6NKN8 68 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 PRAMEF10O60809 474 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 MTRF1O75570 445 aaKnown RBP17.72■□□□□ 0.43
SCARF1-202ENST00000348987 CTSOP43234 321 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-202ENST00000348987 CCT3P49368 545 aaKnown RBP17.72■□□□□ 0.43
SCARF1-202ENST00000348987 CTAG1AP78358 180 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 RBBP4Q09028 425 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 GRK1Q15835 563 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 HJURPQ8NCD3 748 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-202ENST00000348987 HTATIP2Q9BUP3 242 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 MED28Q9H204 178 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 THSD1Q9NS62 852 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 GABRR3A8MPY1 467 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 ABLIM3O94929 683 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 EFEMP2O95967 443 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 HOXD4P09016 255 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-202ENST00000348987 SSTR2P30874 369 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 XCR1P46094 333 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 AVPR1BP47901 424 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 EXOSC2Q13868 293 aaKnown RBP17.72■□□□□ 0.43
SCARF1-202ENST00000348987 KCNC3Q14003 757 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 BCL2L15Q5TBC7 163 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF783Q6ZMS7 281 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 LRRC17Q8N6Y2 441 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 TCEANCQ8N8B7 351 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 NFKBIDQ8NI38 313 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 ENOPH1Q9UHY7 261 aa17.72■□□□□ 0.43
SCARF1-202ENST00000348987 RPL36Q9Y3U8 105 aaKnown RBP17.72■□□□□ 0.43
SCARF1-202ENST00000348987 PRR23AA6NEV1 266 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 QSOX1O00391 747 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 SERPINI2O75830 405 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 NCR1O76036 304 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 CPEP16870 476 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 CD70P32970 193 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 ETV5P41161 510 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 ETV1P50549 477 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 SNRPGP62308 76 aaKnown RBP17.71■□□□□ 0.43
SCARF1-202ENST00000348987 FRG2Q64ET8 278 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 GPR139Q6DWJ6 353 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 CRTC1Q6UUV9 634 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 ARSKQ6UWY0 536 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 TAGAPQ8N103 731 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 TMEM163Q8TC26 289 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 CREB3L1Q96BA8 519 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 FRG2BQ96QU4 278 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 TMEM175Q9BSA9 504 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 ANAPC1Q9H1A4 1944 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 H3BN98 237 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 NRG2O14511 850 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-202ENST00000348987 CASKO14936 926 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 MTX2O75431 263 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 SPAM1P38567 509 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 EVX1P49640 407 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 BOP1Q14137 746 aaKnown RBP17.71■□□□□ 0.43
SCARF1-202ENST00000348987 OR2G6Q5TZ20 316 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 GARNL3Q5VVW2 1013 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 LAPTM4BQ86VI4 370 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 CELF5Q8N6W0 485 aaKnown RBP17.71■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF655Q8N720 491 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-202ENST00000348987 ZBTB44Q8NCP5 570 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 OR11H7Q8NGC8 314 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 IGSF21Q96ID5 467 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 SORCS2Q96PQ0 1159 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 C2orf49Q9BVC5 232 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-202ENST00000348987 ERVMER34-1Q9H9K5 563 aa17.71■□□□□ 0.43
SCARF1-202ENST00000348987 LZTS3O60299 673 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-202ENST00000348987 APOL3O95236 402 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 ITPKAP23677 461 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 HMGA2P52926 109 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 DDX39BQ13838 428 aaKnown RBP17.7■□□□□ 0.42
SCARF1-202ENST00000348987 SCARB2Q14108 478 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 KLHL12Q53G59 568 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 SPOUT1Q5T280 376 aaKnown RBP17.7■□□□□ 0.42
SCARF1-202ENST00000348987 RETSATQ6NUM9 610 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 CEACAM20Q6UY09 585 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 MTERF1Q99551 399 aaKnown RBP17.7■□□□□ 0.42
SCARF1-202ENST00000348987 RANBP3Q9H6Z4 567 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-202ENST00000348987 RDH14Q9HBH5 336 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 ZC4H2Q9NQZ6 224 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 CD84Q9UIB8 345 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 TRBV4-1A0A0J9YWV2 114 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 HEPACAM2A8MVW5 462 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 PRRG1O14668 218 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 CLCNKAP51800 687 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 LMAN2Q12907 356 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 BTN1A1Q13410 526 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 CPTPQ5TA50 214 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 SERPINA13PQ6UXR4 307 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 CASP12Q6UXS9 341 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 GPALPP1Q8IXQ4 340 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 RIT1Q92963 219 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms