RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 EXTL2Q9UBQ6 330 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 SPEF1Q9Y4P9 236 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 GABRR3A8MPY1 467 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 NDUFS4O43181 175 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 GPR37L1O60883 481 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 KCNJ13O60928 360 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 ZNF3P17036 446 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 F8A1P23610 371 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 IGFBP6P24592 240 aaPredicted RBP14.06□□□□□ -0.16
NUP50-201ENST00000347635 ACVR2AP27037 513 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 MLLT1Q03111 559 aaPredicted RBP14.06□□□□□ -0.16
NUP50-201ENST00000347635 NXPE4Q6UWF7 544 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 ZNF852Q6ZMS4 543 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 ADGRD2Q7Z7M1 963 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 PSD4Q8NDX1 1056 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 AMBRA1Q9C0C7 1298 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CLCA3PQ9Y6N3 262 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CENPBD1B2RD01 187 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 MID1O15344 667 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 HLA-EP13747 358 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CELP19835 753 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 DRD1P21728 446 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CD70P32970 193 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 SOX3P41225 446 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 SLC9A3P48764 834 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 ISL1P61371 349 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 SLC3A1Q07837 685 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CTU2Q2VPK5 515 aaKnown RBP14.06□□□□□ -0.16
NUP50-201ENST00000347635 GGTA1PQ4G0N0 100 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 C6orf120Q7Z4R8 191 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 RIMKLAQ8IXN7 391 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 GHDCQ8N2G8 530 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 GDPD1Q8N9F7 314 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 LKAAEAR1Q8TD35 194 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 VMP1Q96GC9 406 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 LHX3Q9UBR4 397 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CCR7P32248 378 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 VLDLRP98155 873 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 TAS1R1Q7RTX1 841 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 METTL4Q8N3J2 472 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 ASB15Q8WXK1 588 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CIDECQ96AQ7 238 aaPredicted RBP14.06□□□□□ -0.16
NUP50-201ENST00000347635 CHIAQ9BZP6 476 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 BRD7Q9NPI1 651 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 CNOT2Q9NZN8 540 aaKnown RBP14.06□□□□□ -0.16
NUP50-201ENST00000347635 KLHL42Q9P2K6 505 aa14.06□□□□□ -0.16
NUP50-201ENST00000347635 ANHXE9PGG2 379 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 GBX2P52951 348 aaPredicted RBP14.05□□□□□ -0.16
NUP50-201ENST00000347635 AGAP6Q5VW22 663 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 TMEM19Q96HH6 336 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 AGAP4Q96P64 663 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 SMAD6O43541 496 aaKnown RBP14.05□□□□□ -0.16
NUP50-201ENST00000347635 SLC16A8O95907 504 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 STATHP02808 62 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 HOXA9P31269 272 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 DHPSP49366 369 aaPredicted RBP14.05□□□□□ -0.16
NUP50-201ENST00000347635 PTPRRQ15256 657 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 LINC00299Q6ZSB3 139 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 TMEM151AQ8N4L1 468 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 RFT1Q96AA3 541 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 KLHDC7BQ96G42 594 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 MARK1Q9P0L2 795 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 IKZF2Q9UKS7 526 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 HCN2Q9UL51 889 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 TRBV23OR9-2A0A075B6M9 112 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 A0A1W2PQL4 384 aaPredicted RBP14.05□□□□□ -0.16
NUP50-201ENST00000347635 TAPBPO15533 448 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 CXCL10P02778 98 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 CLCNKAP51800 687 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 LHX8Q68G74 356 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 SLC9B2Q86UD5 537 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 VWA5B2Q8N398 1253 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 DNAJC22Q8N4W6 341 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 OR7G3Q8NG95 312 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 PIGKQ92643 395 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 ZBP1Q9H171 429 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 NLGN3Q9NZ94 848 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 SEMA3DO95025 777 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 TACR1P25103 407 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 UGT2B10P36537 528 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 GP2P55259 537 aaKnown RBP14.05□□□□□ -0.16
NUP50-201ENST00000347635 PPP2R2BQ00005 443 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 Q6ZPB1 254 aaPredicted RBP14.05□□□□□ -0.16
NUP50-201ENST00000347635 METTL21AQ8WXB1 218 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 C1QTNF3Q9BXJ4 246 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 TMEM98Q9Y2Y6 226 aa14.05□□□□□ -0.16
NUP50-201ENST00000347635 OR5K4A6NMS3 321 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 GTPBP1O00178 669 aaKnown RBP14.04□□□□□ -0.16
NUP50-201ENST00000347635 B3GALT2O43825 422 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 RCBTB2O95199 551 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 C8orf89P0DMQ9 161 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 OXA1LQ15070 435 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 GPR68Q15743 365 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 RPS26P11Q5JNZ5 115 aaPredicted RBP14.04□□□□□ -0.16
NUP50-201ENST00000347635 ENTHD1Q8IYW4 607 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 LMLNQ96KR4 655 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
NUP50-201ENST00000347635 SLA2Q9H6Q3 261 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 PSORS1C1Q9UIG5 152 aa14.04□□□□□ -0.16
NUP50-201ENST00000347635 SLC35F4A4IF30 521 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms