RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SLC28A2O43868 658 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 PRICKLE3O43900 615 aaPredicted RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 SOX14O95416 240 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 GPR89BP0CG08 455 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 PEBP1P30086 187 aaKnown RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 TIE1P35590 1138 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 CDC42P60953 191 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 ZIC1Q15915 447 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 INAQ16352 499 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 DEF8Q6ZN54 512 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 OR8K5Q8NH50 307 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 XAGE5Q8WWM1 108 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 JPH3Q8WXH2 748 aaPredicted RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 FGF14Q92915 247 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 DHRS1Q96LJ7 313 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 C1QTNF2Q9BXJ5 285 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 WDR12Q9GZL7 423 aaKnown RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 PHPT1Q9NRX4 125 aaPredicted RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 SPHK1Q9NYA1 384 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 SCHIP1Q9P0W5 487 aaPredicted RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 KLHL20Q9Y2M5 609 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 F5P12259 2224 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 MAN2B1O00754 1011 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 EPPINO95925 133 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 ADH1BP00325 375 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 APODP05090 189 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 MAT2AP31153 395 aaKnown RBP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 GRK3P35626 688 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 IGFALSP35858 605 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 PBX2P40425 430 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 LIMK1P53667 647 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 LSM11P83369 360 aaKnown RBP eCLIP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 MLC1Q15049 377 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 PERM1Q5SV97 790 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 PTCHD4Q6ZW05 846 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 OR2L8Q8NGY9 312 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 MS4A6EQ96DS6 147 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 OR5M11Q96RB7 305 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 IL4I1Q96RQ9 567 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 MYADMQ96S97 322 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 FUZQ9BT04 418 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 OR51E2Q9H255 320 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 MVB12BQ9H7P6 319 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 C11orf16Q9NQ32 467 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 SLC35C2Q9NQQ7 365 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 PRDM7Q9NQW5 492 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 SEC14L3Q9UDX4 400 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 MOSPD1Q9UJG1 213 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 SLC17A4Q9Y2C5 497 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 ATG4BQ9Y4P1 393 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 A0A1W2PQU0 124 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 A0A1W2PR48 441 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 BOLA2-SMG1P6H3BVE0 249 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 M0R3H8 397 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 TEAD1P28347 426 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 GDI1P31150 447 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 EIF2DP41214 584 aaKnown RBP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 CLK1P49759 484 aaKnown RBP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 RAB15P59190 212 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 PIN1Q13526 163 aaPredicted RBP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 COL9A2Q14055 689 aaPredicted RBP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 PARM1Q6UWI2 310 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 SUN3Q8TAQ9 357 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 SLC7A13Q8TCU3 470 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 PPP1R14BQ96C90 147 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 TIMM29Q9BSF4 260 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 YIPF4Q9BSR8 244 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 ZCCHC3Q9NUD5 404 aaKnown RBP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 LMCD1Q9NZU5 365 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 ACAD8Q9UKU7 415 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 A4GNTQ9UNA3 340 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 ASB4Q9Y574 426 aa14.6□□□□□ -0.07
UPF3B-202ENST00000345865 GPC6Q9Y625 555 aaPredicted RBP14.6□□□□□ -0.07
UPF3B-202ENST00000345865 K7EQS6 105 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 LINC01565O15544 149 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 ERI3O43414 337 aaKnown RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 ADAP00813 363 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 GPC1P35052 558 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 KIR2DL1P43626 348 aaPredicted RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SERPINB10P48595 397 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 NCBP2P52298 156 aaKnown RBP eCLIP14.59□□□□□ -0.075e-9■■■■■ 31.9
UPF3B-202ENST00000345865 PRKAG1P54619 331 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 FUT5Q11128 374 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SLAMF1Q13291 335 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 OXA1LQ15070 435 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TCEA2Q15560 299 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 ARMCX4Q5H9R4 360 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 YAF2Q8IY57 180 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TBC1D19Q8N5T2 526 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 OR14C36Q8NHC7 312 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 S100ZQ8WXG8 99 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 CNRIP1Q96F85 164 aaPredicted RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SLC35G5Q96KT7 338 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 UCK2Q9BZX2 261 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 MRPS30Q9NP92 439 aaKnown RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 FBXL12Q9NXK8 326 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TRPC4Q9UBN4 977 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 GPSM3Q9Y4H4 160 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SCN3AQ9NY46 2000 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 PDZK1P1A8MUH7 402 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms