RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 ACOT4Q8N9L9 421 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 ANKRD7Q92527 254 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 ART5Q96L15 291 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 RILPQ96NA2 401 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 KCNC2Q96PR1 638 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 UCN2Q96RP3 112 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 ROGDIQ9GZN7 287 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 WWTR1Q9GZV5 400 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 PIGMQ9H3S5 423 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 EHD1Q9H4M9 534 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRA2B-202ENST00000342294 SLC17A6Q9P2U8 582 aa15.4■□□□□ 0.06
TRA2B-202ENST00000342294 CPN1P15169 458 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 PGAM1P18669 254 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 MC3RP41968 323 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 PTH2RP49190 550 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 CAPRIN1Q14444 709 aaKnown RBP15.39■□□□□ 0.05
TRA2B-202ENST00000342294 EBPQ15125 230 aaKnown RBP15.39■□□□□ 0.05
TRA2B-202ENST00000342294 WIPI1Q5MNZ9 446 aaPredicted RBP15.39■□□□□ 0.05
TRA2B-202ENST00000342294 TTC27Q6P3X3 843 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 TMEM64Q6YI46 380 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 C20orf204Q6ZNR8 217 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 SLC29A4Q7RTT9 530 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 ZNF441Q8N8Z8 693 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 NAT8LQ8N9F0 302 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 BBOF1Q8ND07 529 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 SPPL2AQ8TCT8 520 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 DOK4Q8TEW6 326 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 RHBDF1Q96CC6 855 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 RBM18Q96H35 190 aaKnown RBP15.39■□□□□ 0.05
TRA2B-202ENST00000342294 MARK4Q96L34 752 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 WFIKKN1Q96NZ8 548 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 GAL3ST4Q96RP7 486 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 TM9SF2Q99805 663 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 EGFL8Q99944 293 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 TUBA1CQ9BQE3 449 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 TBCDQ9BTW9 1192 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 UBTD1Q9HAC8 227 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 GPRC5BQ9NZH0 403 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 OARD1Q9Y530 152 aa15.39■□□□□ 0.05
TRA2B-202ENST00000342294 CHD3Q12873 2000 aaKnown RBP15.39■□□□□ 0.05
TRA2B-202ENST00000342294 NPEPPSL1A6NEC2 478 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 TP53I11O14683 189 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 DYRK3O43781 588 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 ACTL6AO96019 429 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 CLPSP04118 112 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 CYP4B1P13584 511 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 PAX1P15863 534 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 ZNF37AP17032 561 aaPredicted RBP15.38■□□□□ 0.05
TRA2B-202ENST00000342294 CRYGSP22914 178 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 ZNF75DP51815 510 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 SLC37A1P57057 533 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 FBXW4P57775 412 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 BIKQ13323 160 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 RPS6KA2Q15349 733 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 FAM45BPQ6NSW5 357 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 SRFBP1Q8NEF9 429 aaKnown RBP15.38■□□□□ 0.05
TRA2B-202ENST00000342294 FAM45AQ8TCE6 357 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 WNT2BQ93097 391 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 INTS12Q96CB8 462 aaKnown RBP15.38■□□□□ 0.05
TRA2B-202ENST00000342294 WDR34Q96EX3 536 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 SECISBP2Q96T21 854 aaKnown RBP15.38■□□□□ 0.05
TRA2B-202ENST00000342294 G6PC3Q9BUM1 346 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 CAPS2Q9BXY5 557 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 CORO1CQ9ULV4 474 aaPredicted RBP15.38■□□□□ 0.05
TRA2B-202ENST00000342294 GUCA1BQ9UMX6 200 aa15.38■□□□□ 0.05
TRA2B-202ENST00000342294 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 IQANK1A0A1B0GTG1 560 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 RTCAO00442 366 aaKnown RBP15.37■□□□□ 0.05
TRA2B-202ENST00000342294 TNFSF13O75888 250 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 CD22P20273 847 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 HIST1H1TP22492 207 aaPredicted RBP15.37■□□□□ 0.05
TRA2B-202ENST00000342294 CPN2P22792 545 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 LOXP28300 417 aaPredicted RBP15.37■□□□□ 0.05
TRA2B-202ENST00000342294 PTPN6P29350 595 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 HERVK_113P63132 956 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 ERVK-8P63133 956 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 PLIN5Q00G26 463 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 FAM27E3Q08E93 113 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 SPRED3Q2MJR0 410 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 TEDDM1Q5T9Z0 273 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 HMBOX1Q6NT76 420 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 RNF111Q6ZNA4 994 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 PACS2Q86VP3 889 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 TAGAPQ8N103 731 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 FAM83FQ8NEG4 500 aaPredicted RBP15.37■□□□□ 0.05
TRA2B-202ENST00000342294 PIK3IP1Q96FE7 263 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 TMEM41AQ96HV5 264 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 ERVK-6Q9BXR3 956 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 MS4A8Q9BY19 250 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 PLAC1Q9HBJ0 212 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 CLCF1Q9UBD9 225 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 PACSIN3Q9UKS6 424 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 ERVK-19Q9WJR5 959 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 SPACA6W5XKT8 324 aa15.37■□□□□ 0.05
TRA2B-202ENST00000342294 MED12Q93074 2177 aa15.36■□□□□ 0.05
TRA2B-202ENST00000342294 OR6C76A6NM76 312 aa15.36■□□□□ 0.05
TRA2B-202ENST00000342294 SOX30O94993 753 aa15.36■□□□□ 0.05
TRA2B-202ENST00000342294 TTC4O95801 387 aa15.36■□□□□ 0.05
TRA2B-202ENST00000342294 ALOX15P16050 662 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms