RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TINAGQ9UJW2 476 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 HHLA1C9JL84 531 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 D6RAR5 112 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 L7N2F9 121 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 CLDN9O95484 217 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 LPLP06858 475 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 XCR1P46094 333 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 RPS7P62081 194 aaKnown RBP17.63■□□□□ 0.41
SMPD1-201ENST00000342245 STK40Q8N2I9 435 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 OR52I1Q8NGK6 324 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 OR5M3Q8NGP4 307 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 ADAMTS19Q8TE59 1207 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 NSMAFQ92636 917 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 SENP5Q96HI0 755 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-201ENST00000342245 FAM126AQ9BYI3 521 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-201ENST00000342245 DNTTIP1Q9H147 329 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 NSUN3Q9H649 340 aaKnown RBP17.63■□□□□ 0.41
SMPD1-201ENST00000342245 ESRP2Q9H6T0 727 aaKnown RBP17.63■□□□□ 0.41
SMPD1-201ENST00000342245 WWOXQ9NZC7 414 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 UTRNP46939 3433 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 VTNP04004 478 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 CD96P40200 585 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 PTGER3P43115 390 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 LILRA4P59901 499 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SSTP61278 116 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 WDR5P61964 334 aaKnown RBP17.62■□□□□ 0.41
SMPD1-201ENST00000342245 FABP5Q01469 135 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 TAF1AQ15573 450 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-201ENST00000342245 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 NLRC3Q7RTR2 1065 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SYT14Q8NB59 555 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 POF1BQ8WVV4 589 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SPATA5L1Q9BVQ7 753 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 TMPRSS13Q9BYE2 586 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 C11orf16Q9NQ32 467 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 PRKAG2Q9UGJ0 569 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 C2orf81A6NN90 581 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 LOC730098B7Z3J9 87 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 B3GALT4O96024 378 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 GASTP01350 101 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 HLA-DPB1P04440 258 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 INSRRP14616 1297 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 TYRP14679 529 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 CSKP41240 450 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 RABGGTBP53611 331 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 CAV3P56539 151 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 ARTNQ5T4W7 220 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 BTN2A1Q7KYR7 527 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 RAB11FIP2Q7L804 512 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SHFQ7M4L6 423 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 PDZD9Q8IXQ8 264 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 CMIPQ8IY22 773 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 HMCESQ96FZ2 354 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SMARCD1Q96GM5 515 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SLC38A3Q99624 504 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SEMA3CQ99985 751 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 SPRTNQ9H040 489 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-201ENST00000342245 ABCG4Q9H172 646 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 RERGLQ9H628 205 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 FLRT1Q9NZU1 646 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 EPHA6Q9UF33 1036 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 CBLCQ9ULV8 474 aa17.62■□□□□ 0.41
SMPD1-201ENST00000342245 LOC105369274A0A096LPK9 316 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 SMIM30A4D0T7 59 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 LGALS8O00214 317 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 PRAF2O60831 178 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ITGA10O75578 1167 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 APOC3P02656 99 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ELK1P19419 428 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 GALP22466 123 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 PITPNBP48739 271 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 RGNQ15493 299 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ST3GAL2Q16842 350 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 TCTE1Q5JU00 501 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ATRAIDQ6UW56 229 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 TMIGD1Q6UXZ0 262 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 OR4N4Q8N0Y3 316 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 FAM26EQ8N5C1 309 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 OR56B4Q8NH76 319 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 KCTD12Q96CX2 325 aaKnown RBP17.61■□□□□ 0.41
SMPD1-201ENST00000342245 EGFL8Q99944 293 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 NMNAT1Q9HAN9 279 aaPredicted RBP17.61■□□□□ 0.41
SMPD1-201ENST00000342245 TESQ9UGI8 421 aaKnown RBP17.61■□□□□ 0.41
SMPD1-201ENST00000342245 GPN3Q9UHW5 284 aaPredicted RBP17.61■□□□□ 0.41
SMPD1-201ENST00000342245 MGAT4BQ9UQ53 548 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 TMEM5Q9Y2B1 443 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 SMIM28A0A1B0GU29 152 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 RECQL4O94761 1208 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 CPSF4O95639 269 aaKnown RBP17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ECDO95905 644 aaPredicted RBP17.61■□□□□ 0.41
SMPD1-201ENST00000342245 KCNE1P15382 129 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 RHOQP17081 205 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ACSL1P33121 698 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ETV5P41161 510 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 RGS4P49798 205 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 C21orf58P58505 322 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 PAQR6Q6TCH4 344 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 TMEM91Q6ZNR0 172 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 OR4K2Q8NGD2 314 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms