RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 P4HTMQ9NXG6 502 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 CPSF2Q9P2I0 782 aaKnown RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 NAALAD2Q9Y3Q0 740 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 MEGF11A6BM72 1044 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 ARGFXA6NJG6 315 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 SGK494L7N484 410 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 CDH16O75309 829 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 BMP10O95393 424 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 RPS17P08708 135 aaKnown RBP9.65□□□□□ -0.86
TPM3-207ENST00000341372 ZNF888P0CJ79 500 aaPredicted RBP9.65□□□□□ -0.86
TPM3-207ENST00000341372 IL10P22301 178 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 SERPINB1P30740 379 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 EFNA3P52797 238 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 SOX8P57073 446 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 SKP1P63208 163 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 MAT1AQ00266 395 aaKnown RBP9.65□□□□□ -0.86
TPM3-207ENST00000341372 SYT16Q17RD7 645 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 LIPJQ5W064 366 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 GOLGA7Q7Z5G4 137 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 RIBC1Q8N443 379 aaPredicted RBP9.65□□□□□ -0.86
TPM3-207ENST00000341372 TEX9Q8N6V9 391 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 FAM76AQ8TAV0 307 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 UBE2E3Q969T4 207 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 SNX22Q96L94 193 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 FER1L6-AS2Q96M78 137 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 VRK1Q99986 396 aaPredicted RBP9.65□□□□□ -0.86
TPM3-207ENST00000341372 ROPN1BQ9BZX4 212 aaPredicted RBP9.65□□□□□ -0.86
TPM3-207ENST00000341372 ROPN1Q9HAT0 212 aaPredicted RBP9.65□□□□□ -0.86
TPM3-207ENST00000341372 PNPOQ9NVS9 261 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 PSD3Q9NYI0 1048 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 TMEM216Q9P0N5 145 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 C3orf18Q9UK00 162 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 PCTPQ9UKL6 214 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 DOCK10Q96BY6 2186 aa9.65□□□□□ -0.86
TPM3-207ENST00000341372 BOD1L1Q8NFC6 3051 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 LOC102723996A0A087X1L8 192 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 LRIT2A6NDA9 550 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 SMIM23A6NLE4 172 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 A8MT66 165 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 IDSB3KWA1 339 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 MKRN2OSH3BPM6 223 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 FFAR3O14843 346 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 GPR42O15529 346 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 SMIM24O75264 130 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 RDH16O75452 317 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 DNAJB5O75953 348 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 SIX3O95343 332 aaPredicted RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 CREB1P16220 341 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 EEF1DP29692 281 aaKnown RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 HNRNPH1P31943 449 aaKnown RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 HPDP32754 393 aaPredicted RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 HNF4AP41235 474 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 MAGOHP61326 146 aaKnown RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 STXBP1P61764 594 aaKnown RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 IFFO1Q0D2I5 559 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 GTF2H2Q13888 395 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 TOR1AIP1Q5JTV8 583 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 DCAF10Q5QP82 559 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 ADNP2Q6IQ32 1131 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 TCTN3Q6NUS6 607 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 GTF2H2CQ6P1K8 395 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 KIRREL2Q6UWL6 708 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 SHISA6Q6ZSJ9 500 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 Q8N1Y9 231 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 L3MBTL4Q8NA19 623 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 OR51Q1Q8NH59 317 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 C9orf43Q8TAL5 461 aaPredicted RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 ZNF473Q8WTR7 871 aaKnown RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 MS4A6EQ96DS6 147 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 LRRC46Q96FV0 321 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 OR1F2PQ96R84 312 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 SLC25A18Q9H1K4 315 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 CENPHQ9H3R5 247 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 KLHL31Q9H511 634 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.65□□□□□ -0.87
TPM3-207ENST00000341372 TBK1Q9UHD2 729 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 PCDHGB4Q9UN71 923 aa9.65□□□□□ -0.87
TPM3-207ENST00000341372 ZNF462Q96JM2 2506 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 ANKDD1BA6NHY2 528 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 PEX12O00623 359 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 SHOX2O60902 331 aaPredicted RBP9.64□□□□□ -0.87
TPM3-207ENST00000341372 SERPIND1P05546 499 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 CHAF1BQ13112 559 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 SCARB2Q14108 478 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 RBBP7Q16576 425 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 HIST2H2ACQ16777 129 aaPredicted RBP9.64□□□□□ -0.87
TPM3-207ENST00000341372 GGTA1PQ4G0N0 100 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 DEFB134Q4QY38 66 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 HIST2H2AA3Q6FI13 130 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 MED27Q6P2C8 311 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 TMEM205Q6UW68 189 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 EXOC3L1Q86VI1 746 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 SHISA5Q8N114 240 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 ZNF843Q8N446 348 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 OR2L5Q8NG80 312 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 OR7G3Q8NG95 312 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 OR11G2Q8NGC1 345 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 ZNF483Q8TF39 744 aaPredicted RBP9.64□□□□□ -0.87
TPM3-207ENST00000341372 PHF21BQ96EK2 531 aa9.64□□□□□ -0.87
TPM3-207ENST00000341372 VPS50Q96JG6 964 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms