RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TNFSF14O43557 240 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 CBFA2T3O75081 653 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 C1QCP02747 245 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 TFAP2AP05549 437 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 GNAO1P09471 354 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 ZNF10P21506 573 aaPredicted RBP14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 GPC1P35052 558 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 RELAQ04206 551 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 HYAL2Q12891 473 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 C16orf72Q14CZ0 275 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 PRSS53Q2L4Q9 553 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 MRM1Q6IN84 353 aaKnown RBP14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 REEP3Q6NUK4 255 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 ZNF438Q7Z4V0 828 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 VTCN1Q7Z7D3 282 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 ARMC8Q8IUR7 673 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 MMP21Q8N119 569 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 ACOT4Q8N9L9 421 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 AVL9Q8NBF6 648 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 SPPL2AQ8TCT8 520 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 BBS4Q96RK4 519 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 TOR3AQ9H497 397 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 RUBCNLQ9H714 662 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 SLC35C2Q9NQQ7 365 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 PRDM7Q9NQW5 492 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 ABCG2Q9UNQ0 655 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 SAMHD1Q9Y3Z3 626 aaKnown RBP14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 PCDHGB3Q9Y5G1 929 aa14.35□□□□□ -0.11
TUBB4B-201ENST00000340384 OR2A25A4D2G3 310 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 BTN3A3O00478 584 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 UGT2B11O75310 529 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 BMP10O95393 424 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 C9P02748 559 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 ITGAMP11215 1152 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 IGFBP5P24593 272 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 AQP1P29972 269 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 IST1P53990 364 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 KCNJ10P78508 379 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 VLDLRP98155 873 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 EEF1A2Q05639 463 aaKnown RBP14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 HSPB3Q12988 150 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 ZIK1Q3SY52 487 aaPredicted RBP14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 GUSBP11Q6P575 273 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 CEACAM20Q6UY09 585 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 TMEM64Q6YI46 380 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 ZNF793Q6ZN11 406 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 THAP5Q7Z6K1 395 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 FAM20CQ8IXL6 584 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 ZNF655Q8N720 491 aaPredicted RBP14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 BAHD1Q8TBE0 780 aaPredicted RBP14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 SFXN5Q8TD22 340 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 RASSF5Q8WWW0 418 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 GEMIN6Q8WXD5 167 aaKnown RBP14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 KLHL31Q9H511 634 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 SMURF2Q9HAU4 748 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 THSD1Q9NS62 852 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 FAM118AQ9NWS6 357 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 ACTR10Q9NZ32 417 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 KIF17Q9P2E2 1029 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 LRIT1Q9P2V4 623 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 PHF11Q9UIL8 331 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 PSME2Q9UL46 239 aa14.34□□□□□ -0.11
TUBB4B-201ENST00000340384 GSAPA4D1B5 854 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 B4GAT1O43505 415 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 NUDT21O43809 227 aaKnown RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 SEC24DO94855 1032 aaPredicted RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 UGT2B7P16662 529 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 GRK6P43250 576 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 CCT3P49368 545 aaKnown RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 ESRRGP62508 458 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 TOP3AQ13472 1001 aaPredicted RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 GNA13Q14344 377 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 NR1D2Q14995 579 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 SUZ12Q15022 739 aaKnown RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 RBM48Q5RL73 367 aaKnown RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 PERM1Q5SV97 790 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 STPG1Q5TH74 334 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 C6orf120Q7Z4R8 191 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 GALNT10Q86SR1 603 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 SATL1Q86VE3 508 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 SAMD14Q8IZD0 417 aaPredicted RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 OFCC1Q8IZS5 231 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 CAMKVQ8NCB2 501 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 SETD9Q8NE22 299 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 OR10Q1Q8NGQ4 319 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 OR8K5Q8NH50 307 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 DGCR14Q96DF8 476 aaKnown RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 SLC35G5Q96KT7 338 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 C7orf34Q96L11 122 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 OR2A14Q96R47 310 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 GRIP2Q9C0E4 1043 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 YIPF3Q9GZM5 350 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 BLOC1S6Q9UL45 172 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 ASB4Q9Y574 426 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 KLK4Q9Y5K2 254 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 U3KQV3 271 aa14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 NUP214P35658 2090 aaPredicted RBP14.33□□□□□ -0.11
TUBB4B-201ENST00000340384 A0A0G2JN53 185 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms