RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CHDHQ8NE62 594 aaPredicted RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 JOSD2Q8TAC2 188 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 PDCD2LQ9BRP1 358 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 ZFYVE16Q7Z3T8 1539 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 A0A1W2PPV4 95 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 SLC1A7O00341 560 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 HOXD12P35452 270 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 UFM1P61960 85 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 SPOCK1Q08629 439 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 STEAP4Q687X5 459 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 ZSWIM9Q86XI8 627 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 OR8K5Q8NH50 307 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 ST6GALNAC5Q9BVH7 336 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 MEPEQ9NQ76 525 aaPredicted RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 SOX30O94993 753 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 ZDHHC11BP0C7U3 371 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 ZNF84P51523 738 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 PMPCAQ10713 525 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 CAMK2DQ13557 499 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 NUDT13Q86X67 352 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 RNF130Q86XS8 419 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 FNIP2Q9P278 1114 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 ZDHHC2Q9UIJ5 367 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 LRRC7Q96NW7 1537 aa12.33□□□□□ -0.43
USP47-202ENST00000339865 DCDC2BA2VCK2 349 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 GLOD5A6NK44 160 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 AKR1A1P14550 325 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 CDKN2BP42772 138 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 TMEM35AQ53FP2 167 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 VITQ6UXI7 678 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 ZFP41Q8N8Y5 198 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 OR2T33Q8NG76 320 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 KCNIP1Q9NZI2 227 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 OR5H14A6NHG9 310 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 OR5H1A6NKK0 313 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 RFXAPO00287 272 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 ADRB3P13945 408 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 GGT2P36268 569 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 ANKRD22Q5VYY1 191 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 FAM205BPQ63HN1 556 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 TTLL10Q6ZVT0 673 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 FAM58AQ8N1B3 248 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SOCS4Q8WXH5 440 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SYNPO2LQ9H987 977 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SHANK2Q9UPX8 1470 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 CNTNAP1P78357 1384 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SPHKAPQ2M3C7 1700 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 KCNQ2O43526 872 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 CILPO75339 1184 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 PRNPP04156 253 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 ACTBP60709 375 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 ACTG1P63261 375 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 CRHR2Q13324 411 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SFRP5Q5T4F7 317 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SGPP2Q8IWX5 399 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 A0A1W2PQL4 384 aaPredicted RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 SIX3O95343 332 aaPredicted RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 FLYWCH1Q4VC44 716 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 KCTD18Q6PI47 426 aaPredicted RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 CMTM1Q8IZ96 169 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SMIM3Q9BZL3 60 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 OR11A1Q9GZK7 315 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 Q9N2J8 555 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 TMEM248Q9NWD8 314 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 KLK3P07288 261 aaPredicted RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 GSK3BP49841 420 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 RAB28P51157 221 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 C9orf57Q5W0N0 161 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 OR51Q1Q8NH59 317 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 RNF32Q9H0A6 362 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SLC25A51Q9H1U9 297 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 KLHL13Q9P2N7 655 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 SARDHQ9UL12 918 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 ADM5C9JUS6 153 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 BEX5Q5H9J7 111 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 FRG2Q64ET8 278 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 FAM199XQ6PEV8 388 aaPredicted RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 NOXA1Q86UR1 476 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 FRG2BQ96QU4 278 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 UHRF1Q96T88 793 aaPredicted RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
USP47-202ENST00000339865 DNMT3AQ9Y6K1 912 aaPredicted RBP12.33□□□□□ -0.44
USP47-202ENST00000339865 J3QR89 54 aa12.32□□□□□ -0.44
USP47-202ENST00000339865 CD48P09326 243 aa12.32□□□□□ -0.44
USP47-202ENST00000339865 UBE2KP61086 200 aa12.32□□□□□ -0.44
USP47-202ENST00000339865 RPP30P78346 268 aaKnown RBP12.32□□□□□ -0.44
USP47-202ENST00000339865 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
USP47-202ENST00000339865 MAPK15Q8TD08 544 aa12.32□□□□□ -0.44
USP47-202ENST00000339865 MUS81Q96NY9 551 aa12.32□□□□□ -0.44
USP47-202ENST00000339865 NUSAP1Q9BXS6 441 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms