RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MMP17Q9ULZ9 603 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 WASHC1A8K0Z3 465 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 CAPN5O15484 640 aaPredicted RBP15.46■□□□□ 0.06
LITAF-201ENST00000339430 TMPRSS11DO60235 418 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 ADRA2AP08913 450 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 DBTP11182 482 aaKnown RBP15.46■□□□□ 0.06
LITAF-201ENST00000339430 CDH3P22223 829 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 CHMP24386 653 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 CCR8P51685 355 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 RELAQ04206 551 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 DNASE1L3Q13609 305 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 HEPACAMQ14CZ8 416 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 WSCD2Q2TBF2 565 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 WASH2PQ6VEQ5 465 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 OR5P2Q8WZ92 322 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 OTUB1Q96FW1 271 aaPredicted RBP15.46■□□□□ 0.06
LITAF-201ENST00000339430 WFDC6Q9BQY6 131 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 OR51E2Q9H255 320 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 C11orf16Q9NQ32 467 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 POLE4Q9NR33 117 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 MBNL1Q9NR56 388 aaKnown RBP15.46■□□□□ 0.06
LITAF-201ENST00000339430 TSC22D4Q9Y3Q8 395 aa15.46■□□□□ 0.06
LITAF-201ENST00000339430 TCRBV21S2A2A0A5A6 115 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 LCMT2O60294 686 aaKnown RBP15.45■□□□□ 0.06
LITAF-201ENST00000339430 SOX14O95416 240 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 IGFBP1P08833 259 aaPredicted RBP15.45■□□□□ 0.06
LITAF-201ENST00000339430 CNR2P34972 360 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 FEN1P39748 380 aaKnown RBP15.45■□□□□ 0.06
LITAF-201ENST00000339430 HMGA2P52926 109 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 KCNC4Q03721 635 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 RPA4Q13156 261 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 MLIPQ5VWP3 458 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 METRNLQ641Q3 311 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 ADAMTSL4Q6UY14 1074 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 OLIG3Q7RTU3 272 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 HMGN2P46Q86SG4 172 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 DENND6BQ8NEG7 585 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 MENTQ9BUN1 341 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 DSN1Q9H410 356 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 XKR8Q9H6D3 395 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 SIRT3Q9NTG7 399 aaPredicted RBP15.45■□□□□ 0.06
LITAF-201ENST00000339430 WDR37Q9Y2I8 494 aa15.45■□□□□ 0.06
LITAF-201ENST00000339430 A0A1W2PPV9 198 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 SEMA7AO75326 666 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 PRKRAO75569 313 aaKnown RBP15.44■□□□□ 0.06
LITAF-201ENST00000339430 SLC35G4P0C7Q5 338 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 CHRNB1P11230 501 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 ERGP11308 486 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 CDC42P60953 191 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 OXA1LQ15070 435 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 KIAA1324Q6UXG2 1013 aaKnown RBP15.44■□□□□ 0.06
LITAF-201ENST00000339430 DEF8Q6ZN54 512 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 PTCHD4Q6ZW05 846 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 LINC01555Q8NAE3 123 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 FERD3LQ96RJ6 166 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 IL4I1Q96RQ9 567 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 MACROD1Q9BQ69 325 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 MROQ9BYG7 248 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 PELI2Q9HAT8 420 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 FBXL21Q9UKT6 434 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 KRBA1A5PL33 1030 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 NDUFS4O43181 175 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 MFN2O95140 757 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 ACP5P13686 325 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 NDUFV2P19404 249 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 CXCR2P25025 360 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 SEC23BQ15437 767 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 ARMCX4Q5H9R4 360 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 SLC46A3Q7Z3Q1 461 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 EGFL6Q8IUX8 553 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 OR4D11Q8NGI4 311 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 OR5D16Q8NGK9 328 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 PSMA8Q8TAA3 256 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 COL21A1Q96P44 957 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 C6orf62Q9GZU0 229 aaPredicted RBP15.44■□□□□ 0.06
LITAF-201ENST00000339430 CD93Q9NPY3 652 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 WASH6PQ9NQA3 447 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 FTSJ1Q9UET6 329 aa15.44■□□□□ 0.06
LITAF-201ENST00000339430 SNRNP200O75643 2136 aaKnown RBP15.44■□□□□ 0.06
LITAF-201ENST00000339430 GLOD5A6NK44 160 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 HMGN4O00479 90 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 PLRG1O43660 514 aaKnown RBP15.43■□□□□ 0.06
LITAF-201ENST00000339430 SEMA3DO95025 777 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 ACADMP11310 421 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 CRISP1P54107 249 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 ADPRHP54922 357 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 PCBP4P57723 403 aaKnown RBP15.43■□□□□ 0.06
LITAF-201ENST00000339430 REEP5Q00765 189 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 MED22Q15528 200 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 COLEC12Q5KU26 742 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 FRMPD2BQ6IN97 320 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 ZNF770Q6IQ21 691 aaPredicted RBP15.43■□□□□ 0.06
LITAF-201ENST00000339430 UBE3DQ7Z6J8 389 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 NUDT13Q86X67 352 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 ZNF687Q8N1G0 1237 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 APOBEC4Q8WW27 367 aaKnown RBP15.43■□□□□ 0.06
LITAF-201ENST00000339430 SMPDL3AQ92484 453 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 DACH2Q96NX9 599 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 OR5M11Q96RB7 305 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 C17orf62Q9BQA9 187 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms