RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 RFPL3SP0C7P2 107 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 GALNSP34059 522 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 GCKP35557 465 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 TRPC1P48995 793 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 TMED10P49755 219 aaKnown RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 NRG3P56975 720 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 HERVK_113P63132 956 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ERVK-8P63133 956 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 PCDH1Q08174 1060 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 CBLBQ13191 982 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 DDX39BQ13838 428 aaKnown RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 E2F2Q14209 437 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 DAZAP2Q15038 168 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 GRTP1Q5TC63 336 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 CYP20A1Q6UW02 462 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 C3orf62Q6ZUJ4 267 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 TBC1D1Q86TI0 1168 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 CDC20BQ86Y33 519 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 LACC1Q8IV20 430 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ZCCHC7Q8N3Z6 543 aaKnown RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 OR10G3Q8NGC4 313 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 DIO2Q92813 273 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 EXT2Q93063 718 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 TP53INP1Q96A56 240 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 HSPBAP1Q96EW2 488 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ZNF597Q96LX8 424 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ALPK1Q96QP1 1244 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 GPR22Q99680 433 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 RBBP8Q99708 897 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 MCMBPQ9BTE3 642 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ERVK-6Q9BXR3 956 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 SLC6A15Q9H2J7 730 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 OR51B5Q9H339 312 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 SNX15Q9NRS6 342 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ZNF358Q9NW07 568 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 LYARQ9NX58 379 aaKnown RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 RNF14Q9UBS8 474 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ERVK-19Q9WJR5 959 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 ITPR3Q14573 2671 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 AKAP6Q13023 2319 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 SYCE1LA8MT33 242 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 SUPT3HB4E1H0 165 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 PROM1O43490 865 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 SUPT3HO75486 399 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 WISP3O95389 354 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 GSTA2P09210 222 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 EPXP11678 715 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 ENDOUP21128 410 aaKnown RBP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 CRABP2P29373 138 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 SSTR1P30872 391 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 CEACAM8P31997 349 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 MASP1P48740 699 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 TNFRSF17Q02223 184 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 DUSP8Q13202 625 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 FASTKD3Q14CZ7 662 aaKnown RBP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 TOMM20Q15388 145 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 NTRK2Q16620 822 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 SPRED3Q2MJR0 410 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 FBXL19-AS1Q494R0 122 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 C6orf163Q5TEZ5 329 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 LIPJQ5W064 366 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 GRHL2Q6ISB3 625 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 CTAGE3PQ8IX95 158 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 HUS1BQ8NHY5 278 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 MBD6Q96DN6 1003 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 UBXN10Q96LJ8 280 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 SECISBP2Q96T21 854 aaKnown RBP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 TIMP4Q99727 224 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 WWTR1Q9GZV5 400 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 ALG9Q9H6U8 611 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 PLEKHA6Q9Y2H5 1048 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 SNX24Q9Y343 169 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 SAR1BQ9Y6B6 198 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 CHCHD2Q9Y6H1 151 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-202ENST00000338995 IKBKGQ9Y6K9 419 aa13.06□□□□□ -0.32
COMMD4-202ENST00000338995 MPDZO75970 2070 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 GOSR1O95249 250 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 SLC35E2P0CK97 266 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 KRT15P19012 456 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 EPORP19235 508 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 OPRM1P35372 400 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 SNTB1Q13884 538 aaKnown RBP13.05□□□□□ -0.32
COMMD4-202ENST00000338995 KEAP1Q14145 624 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 LYPD8Q6UX82 237 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 ISCA2Q86U28 154 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 CREG2Q8IUH2 290 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 ACTR8Q9H981 624 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 SAYSD1Q9NPB0 183 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 PSD3Q9NYI0 1048 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 CNOT11Q9UKZ1 510 aaKnown RBP13.05□□□□□ -0.32
COMMD4-202ENST00000338995 TSC22D4Q9Y3Q8 395 aa13.05□□□□□ -0.32
COMMD4-202ENST00000338995 CCDC189A1A4V9 331 aa13.04□□□□□ -0.32
COMMD4-202ENST00000338995 LRRC3CA6NJW4 275 aa13.04□□□□□ -0.32
COMMD4-202ENST00000338995 KERAO60938 352 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms