RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 HLA-EP13747 358 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 NPPBP16860 134 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 CHMP24386 653 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 CXCR2P25025 360 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 EPHA2P29317 976 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 LIPAP38571 399 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 BDKRB1P46663 353 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 CLK1P49759 484 aaKnown RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 ARFIP1P53367 373 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 CTSCP53634 463 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SMIM11AP58511 58 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 VBP1P61758 197 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 COPZ1P61923 177 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 TRA2BP62995 288 aaKnown RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 HBA1P69905 142 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 IFITM3Q01628 133 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SPIBQ01892 262 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 ALDH6A1Q02252 535 aaKnown RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 SLBPQ14493 270 aaKnown RBP eCLIP10.24□□□□□ -0.77
RTN3-201ENST00000338850 STARD3Q14849 445 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 NDUFA9Q16795 377 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SLC25A30Q5SVS4 291 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.24□□□□□ -0.77
RTN3-201ENST00000338850 SAXO2Q658L1 398 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 TMEM215Q68D42 235 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 ZNF770Q6IQ21 691 aaPredicted RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 NXPE4Q6UWF7 544 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 KIAA1324Q6UXG2 1013 aaKnown RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 CCDC81Q6ZN84 652 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 RABEPKQ7Z6M1 372 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 PIP4P1Q86T03 277 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 TMPRSS11BQ86T26 416 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SLC5A8Q8N695 610 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 DEFB124Q8NES8 71 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SETD6Q8TBK2 473 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SPPL2AQ8TCT8 520 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 ZNF675Q8TD23 568 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 OR5P2Q8WZ92 322 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 NR4A3Q92570 626 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SCAMP4Q969E2 229 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 NEIL2Q969S2 332 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 AP2M1Q96CW1 435 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 NEURL3Q96EH8 262 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 TPD52L3Q96J77 140 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 HSPA12BQ96MM6 686 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 Q96MT0 163 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 QRFPRQ96P65 431 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 MKRN2Q9H000 416 aaKnown RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 PCBD2Q9H0N5 130 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 C3orf14Q9HBI5 128 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 ACER3Q9NUN7 267 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 ZNF226Q9NYT6 803 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 NPAP1Q9NZP6 1156 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 SPATA7Q9P0W8 599 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 USP36Q9P275 1121 aaKnown RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 ACAD8Q9UKU7 415 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 WASF3Q9UPY6 502 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 MGAT4BQ9UQ53 548 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 TRAPPC4Q9Y296 219 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 CACNA1EQ15878 2313 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 TMEM247A6NEH6 219 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 A8MX80 341 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 LOC110117498-PIK3R3F6TDL0 507 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 FAAHO00519 579 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 DIRAS1O95057 198 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 IFNW1P05000 195 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 ELFN1P0C7U0 828 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 XPAP23025 273 aaPredicted RBP10.23□□□□□ -0.77
RTN3-201ENST00000338850 ITGB7P26010 798 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 ACADLP28330 430 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 ETV3P41162 512 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 UGT2B15P54855 530 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 DSTNP60981 165 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 TAP2Q03519 686 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 ILKQ13418 452 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 ZNF234Q14588 700 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 SMN1Q16637 294 aaKnown RBP10.23□□□□□ -0.77
RTN3-201ENST00000338850 EXOC3L2Q2M3D2 409 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 REEP3Q6NUK4 255 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 CD300LDQ6UXZ3 194 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 TRIM69Q86WT6 500 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 FAM129CQ86XR2 697 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 CCDC103Q8IW40 242 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 KRT78Q8N1N4 520 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 TMIEQ8NEW7 156 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 SORCS1Q8WY21 1168 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 PIK3R3Q92569 461 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 FOXJ1Q92949 421 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 MED8Q96G25 268 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 GTPBP2Q9BX10 602 aaKnown RBP10.23□□□□□ -0.77
RTN3-201ENST00000338850 TAPBPLQ9BX59 468 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 SLC25A19Q9HC21 320 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 WASH6PQ9NQA3 447 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 IMPAD1Q9NX62 359 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 WSB2Q9NYS7 404 aaPredicted RBP10.23□□□□□ -0.77
RTN3-201ENST00000338850 SH3BP4Q9P0V3 963 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 FAM32AQ9Y421 112 aaKnown RBP10.23□□□□□ -0.77
RTN3-201ENST00000338850 DNMT3AQ9Y6K1 912 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms