RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GSAPA4D1B5 854 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 OR2W5A6NFC9 320 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CLPXO76031 633 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CCNB2O95067 398 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 AIFM1O95831 613 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 HMGN2P05204 90 aaKnown RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 CTSBP07858 339 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 POLR2CP19387 275 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 PPIBP23284 216 aaKnown RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 CHMP24386 653 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 XCR1P46094 333 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 TMBIM6P55061 237 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 SIM1P81133 766 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 PRDX1Q06830 199 aaKnown RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 ST3GAL4Q11206 333 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 C1orf61Q13536 156 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 DNASE1L3Q13609 305 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 E2F2Q14209 437 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 MED22Q15528 200 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 RPE65Q16518 533 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 DEFB134Q4QY38 66 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 C6orf132Q5T0Z8 1188 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 ZNF776Q68DI1 518 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 IGFN1Q86VF2 1251 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 ARMC8Q8IUR7 673 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 ACOT4Q8N9L9 421 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 OR4C15Q8NGM1 316 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 RNF217Q8TC41 542 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CREB3L4Q8TEY5 395 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 SETD7Q8WTS6 366 aaKnown RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 GAS2L1Q99501 681 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 EPYCQ99645 322 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 MAPKAP1Q9BPZ7 522 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CHCHD6Q9BRQ6 235 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 APOOQ9BUR5 198 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 YTHDF1Q9BYJ9 559 aaKnown RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 DUSP21Q9H596 190 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 ZNF556Q9HAH1 456 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 PLGRKTQ9HBL7 147 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 AHSPQ9NZD4 102 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CORO2BQ9UQ03 480 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 NPIPA5A0A0B4J1W7 369 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 A0A1W2PQF6 199 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 NPIPA7E9PJI5 369 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 WWP2O00308 870 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 KRT75O95678 551 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 ASGR2P07307 311 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CCDC159P0C7I6 412 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 NPIPA8P0DM63 369 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 JUNBP17275 347 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 C5AR1P21730 350 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 TGM4P49221 684 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 PPM1FP49593 454 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 PCBP3P57721 371 aaKnown RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 C21orf58P58505 322 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 HYAL2Q12891 473 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 TARDBPQ13148 414 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNCA-201ENST00000336904 KEAP1Q14145 624 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 DEFB110Q30KQ9 67 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 TJAP1Q5JTD0 557 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CLEC12AQ5QGZ9 265 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CCNJQ5T5M9 372 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 TCTN3Q6NUS6 607 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 ZNF438Q7Z4V0 828 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 PGBD3Q8N328 593 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 STX19Q8N4C7 294 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 B3GNT7Q8NFL0 401 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 OR2L3Q8NG85 312 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 GOT1L1Q8NHS2 421 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 HMGB4Q8WW32 186 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 LCN9Q8WX39 176 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 GEMIN6Q8WXD5 167 aaKnown RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 UBE2E3Q969T4 207 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 HRASLS5Q96KN8 279 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 AMDHD1Q96NU7 426 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 SPATA7Q9P0W8 599 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 CLEC2DQ9UHP7 191 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 GPR52Q9Y2T5 361 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 GPR55Q9Y2T6 319 aaPredicted RBP8.37□□□□□ -1.07
SNCA-201ENST00000336904 ENPP4Q9Y6X5 453 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 TRIOBPQ9H2D6 2365 aa8.37□□□□□ -1.07
SNCA-201ENST00000336904 M0R082 166 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 MFN2O95140 757 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 CH25HO95992 272 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 CHRM4P08173 479 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 ITIH1P19827 911 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 GGT2P36268 569 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 AVPR1BP47901 424 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 CLK1P49759 484 aaKnown RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 GABARAPL2P60520 117 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 RPS21P63220 83 aaKnown RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 ZNF630Q2M218 657 aaPredicted RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 ATAT1Q5SQI0 421 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 SAXO2Q658L1 398 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 TMEM92Q6UXU6 159 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 PAGE2Q7Z2X7 111 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 ZNF605Q86T29 641 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 ADCK1Q86TW2 530 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 VRK2Q86Y07 508 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 OR6T1Q8NGN1 323 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms