RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PUM1Q14671 1186 aaKnown RBP eCLIP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 SLC9A5Q14940 896 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 CAMKMTQ7Z624 323 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 SVOPLQ8N434 492 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 LSM14AQ8ND56 463 aaKnown RBP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 FAM46DQ8NEK8 389 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 SLC6A18Q96N87 628 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 MAGIXQ9H6Y5 334 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 CD320Q9NPF0 282 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 PRDM7Q9NQW5 492 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 EVA1BQ9NVM1 165 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 NTNG1Q9Y2I2 539 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 CLDN24A6NM45 220 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 HMGN4O00479 90 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 SEMA7AO75326 666 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 ANGPTL1O95841 491 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 GSTT2P0CG29 244 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 GSTT2BP0CG30 244 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 FPR1P21462 350 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 ATP5A1P25705 553 aaKnown RBP11.9□□□□□ -0.51
LIMK1-201ENST00000336180 CMPK1P30085 196 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 TGFBR1P36897 503 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 RAD23AP54725 363 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 LIM2P55344 173 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 ESRRGP62508 458 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 RPP38P78345 283 aaKnown RBP11.9□□□□□ -0.51
LIMK1-201ENST00000336180 PCDH1Q08174 1060 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 IFI44LQ53G44 452 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 TTC23Q5W5X9 447 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 ABHD17CQ6PCB6 329 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 B3GNT6Q6ZMB0 384 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 AHSA2Q719I0 299 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 GPR32P1Q8NGA4 272 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 OR10G2Q8NGC3 310 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 AMDHD1Q96NU7 426 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 IL21RQ9HBE5 538 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 LYVE1Q9Y5Y7 322 aa11.9□□□□□ -0.51
LIMK1-201ENST00000336180 A0A0A6YYD5 115 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 TRBV4-1A0A0J9YWV2 114 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 SLC1A7O00341 560 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 HMGN2P05204 90 aaKnown RBP11.89□□□□□ -0.51
LIMK1-201ENST00000336180 IGHV4-34P06331 123 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 UQCRC2P22695 453 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 PIN1Q13526 163 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-201ENST00000336180 ZC3H14Q6PJT7 736 aaKnown RBP11.89□□□□□ -0.51
LIMK1-201ENST00000336180 Q7L0L9 218 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 BCDIN3DQ7Z5W3 292 aaKnown RBP11.89□□□□□ -0.51
LIMK1-201ENST00000336180 B3GNT8Q7Z7M8 397 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 AMER2Q8N7J2 671 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 RSC1A1Q92681 617 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 ISOC1Q96CN7 298 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 ROGDIQ9GZN7 287 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 SLC35C2Q9NQQ7 365 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 CACNA1IQ9P0X4 2223 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 RECKO95980 971 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 SEMG1P04279 462 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 THEGLP0DJG4 465 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 UGT2B7P16662 529 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 DRD1P21728 446 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 BUD31P41223 144 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-201ENST00000336180 MAZP56270 477 aaKnown RBP11.89□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF33BQ06732 778 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 VEZF1Q14119 521 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 MAPK11Q15759 364 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 KCTD21Q4G0X4 260 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 GPAT3Q53EU6 434 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 CCNJQ5T5M9 372 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 FBXO42Q6P3S6 717 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 TAGAPQ8N103 731 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 SLC37A2Q8TED4 501 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 TAS2R16Q9NYV7 291 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 COLEC10Q9Y6Z7 277 aa11.89□□□□□ -0.51
LIMK1-201ENST00000336180 LRRC72A6NJI9 287 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 HNRNPFP52597 415 aaKnown RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ITGA1P56199 1179 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 EEF1A2Q05639 463 aaKnown RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 CCINQ13939 588 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 TSPYL5Q86VY4 417 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 HRASLS2Q9NWW9 162 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 DNMT3AQ9Y6K1 912 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 FANCMQ8IYD8 2048 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 NPIPA5A0A0B4J1W7 369 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 NPIPA7E9PJI5 369 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 H0YAE9 185 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 FFAR1O14842 300 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 PRICKLE3O43900 615 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 PCDHGA12O60330 932 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 KRT75O95678 551 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 NPIPA8P0DM63 369 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ARAFP10398 606 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 CTSEP14091 401 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 CCR3P51677 355 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 C21orf58P58505 322 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF691Q5VV52 312 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 SPARTQ8N0X7 666 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 KIAA1958Q8N8K9 716 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 PROX1Q92786 737 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 SLC35G5Q96KT7 338 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF300Q96RE9 604 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms