RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 CYP27C1Q4G0S4 372 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 KCTD21Q4G0X4 260 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 MANEAQ5SRI9 462 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 KLHL35Q6PF15 583 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 PRSS41Q7RTY9 318 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 C19orf47Q8N9M1 422 aaKnown RBP11.73□□□□□ -0.53
ZNF548-201ENST00000336128 ZNF555Q8NEP9 628 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 TSPAN14Q8NG11 270 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 EPYCQ99645 322 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 AMBRA1Q9C0C7 1298 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 CLK4Q9HAZ1 481 aaKnown RBP11.73□□□□□ -0.53
ZNF548-201ENST00000336128 IL21RQ9HBE5 538 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 LYRM4Q9HD34 91 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 THSD1Q9NS62 852 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 FAM118AQ9NWS6 357 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 PDP1Q9P0J1 537 aaPredicted RBP11.73□□□□□ -0.53
ZNF548-201ENST00000336128 ORC6Q9Y5N6 252 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 SLC22A7Q9Y694 548 aa11.73□□□□□ -0.53
ZNF548-201ENST00000336128 PRAMEF27A3QJZ7 478 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 TMEM247A6NEH6 219 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 HCRTR1O43613 425 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 MITFO75030 526 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 SDC3O75056 442 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 PDE9AO76083 593 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 CLPTM1O96005 669 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 FHP07954 510 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 CD247P20963 164 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 TLX1P31314 330 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 MC3RP41968 323 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 CAPZBP47756 277 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 CSNK1EP49674 416 aaKnown RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 RAD23AP54725 363 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 HNRNPKP61978 463 aaKnown RBP eCLIP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 MLLT1Q03111 559 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 KCNAB2Q13303 367 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 COL9A2Q14055 689 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 LTB4RQ15722 352 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 SYPL1Q16563 259 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 RFX4Q33E94 735 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 TTC23Q5W5X9 447 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 BHLHB9Q6PI77 547 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 CYP4Z1Q86W10 505 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 C17orf82Q86X59 251 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 MUS81Q96NY9 551 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 ZNF300Q96RE9 604 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 ZNF347Q96SE7 839 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 SLC38A3Q99624 504 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 STARD5Q9NSY2 213 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 C3orf18Q9UK00 162 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 TESMINQ9Y4I5 508 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 SLC9B1P1A6NJY1 282 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 LMO7DNF2Z398 122 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 GALR3O60755 368 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 HMGN2P05204 90 aaKnown RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 PIGAP37287 484 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 ANXA11P50995 505 aaKnown RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 DAPP51397 102 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 C21orf59P57076 290 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 PRR5P85299 388 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 LASP1Q14847 261 aaKnown RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 LIN52Q52LA3 116 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 GALNT5Q7Z7M9 940 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 LRRC25Q8N386 305 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 METTL25Q8N6Q8 603 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 OR4K14Q8NGD5 310 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 XAGE5Q8WWM1 108 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 DNASE2BQ8WZ79 361 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 ELP4Q96EB1 424 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 YIPF4Q9BSR8 244 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-201ENST00000336128 C3orf14Q9HBI5 128 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 UCKL1Q9NWZ5 548 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 MS4A12Q9NXJ0 267 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 THEGQ9P2T0 379 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 NAALAD2Q9Y3Q0 740 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 PCDHGB3Q9Y5G1 929 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 CEP192Q8TEP8 1941 aa11.72□□□□□ -0.53
ZNF548-201ENST00000336128 ADAMDEC1O15204 470 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 MFN2O95140 757 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 RECKO95980 971 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 TFAP2AP05549 437 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 NR2F1P10589 423 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 ITGA2P17301 1181 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 RPL5P46777 297 aaKnown RBP11.71□□□□□ -0.53
ZNF548-201ENST00000336128 YAP1P46937 504 aaKnown RBP11.71□□□□□ -0.53
ZNF548-201ENST00000336128 XKP51811 444 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 SPIBQ01892 262 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 SIM2Q14190 667 aaPredicted RBP11.71□□□□□ -0.53
ZNF548-201ENST00000336128 ZC3H12BQ5HYM0 836 aaKnown RBP11.71□□□□□ -0.53
ZNF548-201ENST00000336128 OGFOD3Q6PK18 319 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 MCATQ8IVS2 390 aaKnown RBP11.71□□□□□ -0.53
ZNF548-201ENST00000336128 OR4N5Q8IXE1 308 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 SAMD14Q8IZD0 417 aaPredicted RBP11.71□□□□□ -0.53
ZNF548-201ENST00000336128 CA13Q8N1Q1 262 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 NUP43Q8NFH3 380 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 GPR32P1Q8NGA4 272 aa11.71□□□□□ -0.53
ZNF548-201ENST00000336128 OR5T3Q8NGG3 340 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms