RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 AMDHD1Q96NU7 426 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 WFDC6Q9BQY6 131 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 DDX31Q9H8H2 851 aaKnown RBP16.77■□□□□ 0.27
LRCH3-201ENST00000334859 CHCHD3Q9NX63 227 aaKnown RBP16.77■□□□□ 0.27
LRCH3-201ENST00000334859 DNAJC27Q9NZQ0 273 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 MOSPD1Q9UJG1 213 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 MGAT4BQ9UQ53 548 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 STON1Q9Y6Q2 735 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 A0A0A6YYD5 115 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 A0A1W2PP55 124 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 M0R3H8 397 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 ENTPD6O75354 484 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CLEC3AO75596 197 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 NTSP30990 170 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 EIF2DP41214 584 aaKnown RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 PPP5CP53041 499 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 PRKAG1P54619 331 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 PRDX1Q06830 199 aaKnown RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 RUNX3Q13761 415 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 TSTQ16762 297 aaKnown RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 PLAG1Q6DJT9 500 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 ZNF793Q6ZN11 406 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 FAM92BQ6ZTR7 304 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 OLIG3Q7RTU3 272 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 HMGN2P46Q86SG4 172 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 MINDY2Q8NBR6 621 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 Q96MT0 163 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 BBS4Q96RK4 519 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CDCA4Q9BXL8 241 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 GLIPR2Q9H4G4 154 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 KCNK12Q9HB15 430 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 ABCB10Q9NRK6 738 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 PHPT1Q9NRX4 125 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 REV1Q9UBZ9 1251 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 MYO10Q9HD67 2058 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CKAP5Q14008 2032 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 LRIT2A6NDA9 550 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 OR52A4PA6NMU1 304 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 TPST2O60704 377 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 ERAL1O75616 437 aaKnown RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 OXSR1O95747 527 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 ALPPL2P10696 532 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CD72P21854 359 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 GSTM5P46439 218 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 XKP51811 444 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 TARDBPQ13148 414 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■■■ 31.2
LRCH3-201ENST00000334859 GPM6BQ13491 265 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 FBXO46Q6PJ61 603 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 VITQ6UXI7 678 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CASP12Q6UXS9 341 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 KRT73Q86Y46 540 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 TP53I13Q8NBR0 393 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 OR2A1Q8NGT9 310 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CREB3L4Q8TEY5 395 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CHFRQ96EP1 664 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 ZNF764Q96H86 408 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CAMK1GQ96NX5 476 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 MGLLQ99685 303 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 FAIM2Q9BWQ8 316 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 POLR2J3Q9H1A7 115 aaKnown RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 KLHL31Q9H511 634 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 SLC35C2Q9NQQ7 365 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-201ENST00000334859 PCDHGA3Q9Y5H0 932 aa16.76■□□□□ 0.27
LRCH3-201ENST00000334859 REV3LO60673 3130 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 PRAMEF27A3QJZ7 478 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 PDZK1P1A8MUH7 402 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 DSCR3O14972 297 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 SCAMP1O15126 338 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 CA3P07451 260 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 ALOX5P09917 674 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 TGM1P22735 817 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 FCARP24071 287 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 PIN1Q13526 163 aaPredicted RBP16.75■□□□□ 0.27
LRCH3-201ENST00000334859 CLIP4Q8N3C7 705 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 SLC7A13Q8TCU3 470 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 YIPF4Q9BSR8 244 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 AICDAQ9GZX7 198 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 SFXN1Q9H9B4 322 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 AGAP5A6NIR3 686 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 GRXCR1A8MXD5 290 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 GPR89AB7ZAQ6 455 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 ERI3O43414 337 aaKnown RBP16.75■□□□□ 0.27
LRCH3-201ENST00000334859 GPR89BP0CG08 455 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 DRD2P14416 443 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 HOXB3P14651 431 aaPredicted RBP16.75■□□□□ 0.27
LRCH3-201ENST00000334859 S100A5P33763 92 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 BCL6P41182 706 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 RPS3AP61247 264 aaKnown RBP16.75■□□□□ 0.27
LRCH3-201ENST00000334859 KIAA1161Q6NSJ0 714 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 PGBD2Q6P3X8 592 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 COMTD1Q86VU5 262 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 SLC22A16Q86VW1 577 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 GANCQ8TET4 914 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 CDADC1Q9BWV3 514 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 MRPS30Q9NP92 439 aaKnown RBP16.75■□□□□ 0.27
LRCH3-201ENST00000334859 CCDC59Q9P031 241 aaKnown RBP16.75■□□□□ 0.27
LRCH3-201ENST00000334859 ZNF229Q9UJW7 825 aa16.75■□□□□ 0.27
LRCH3-201ENST00000334859 PLEKHM1Q9Y4G2 1056 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms