RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 TEP1Q99973 2627 aaKnown RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 TRGV8A0A0C4DH27 118 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 A0A0G2JND7 137 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 TGFBR3LH3BV60 316 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 NDUFAB1O14561 156 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 DIAPH2O60879 1101 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 RSL1D1O76021 490 aaKnown RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 SERPINA6P08185 405 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 PRPH2P23942 346 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 NEK2P51955 445 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 HNRNPFP52597 415 aaKnown RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 OR4D2P58180 307 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 IRX1P78414 480 aaPredicted RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 TGM3Q08188 693 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 MAD2L1Q13257 205 aaPredicted RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 ART3Q13508 389 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 DDX39BQ13838 428 aaKnown RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 RUNX2Q13950 521 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 EXT1Q16394 746 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 XKR7Q5GH72 579 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 ZNF468Q5VIY5 522 aaPredicted RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 RPTNQ6XPR3 784 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 QSOX2Q6ZRP7 698 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 NFAM1Q8NET5 270 aaPredicted RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 ACTRT2Q8TDY3 377 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 ELP5Q8TE02 316 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 TUBGCP3Q96CW5 907 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 MS4A6EQ96DS6 147 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 MAELQ96JY0 434 aaKnown RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 ZNF354BQ96LW1 612 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 RILPQ96NA2 401 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 LPAR4Q99677 370 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 CCDC28BQ9BUN5 200 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 DMRT3Q9NQL9 472 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 FARSBQ9NSD9 589 aaKnown RBP13.74□□□□□ -0.21
TSPO-201ENST00000329563 SEC14L3Q9UDX4 400 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 TRIM33Q9UPN9 1127 aa13.74□□□□□ -0.21
TSPO-201ENST00000329563 TCRBV16S1A1N1A0A5B0 115 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ARHGAP10A1A4S6 786 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 LRIT2A6NDA9 550 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 SEMA3DO95025 777 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 UNC5CO95185 931 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 JAK1P23458 1154 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 CD96P40200 585 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 IDH3AP50213 366 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 HTR6P50406 440 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 BTN3A2P78410 334 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ADPRMQ3LIE5 342 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ATP6AP1LQ52LC2 224 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 TCHHL1Q5QJ38 904 aaPredicted RBP13.73□□□□□ -0.21
TSPO-201ENST00000329563 DEPDC1Q5TB30 811 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 SP5Q6BEB4 398 aaPredicted RBP13.73□□□□□ -0.21
TSPO-201ENST00000329563 SPINK14Q6IE38 97 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 CGB2Q6NT52 195 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 NIPAL1Q6NVV3 410 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ZNF808Q8N4W9 903 aaPredicted RBP13.73□□□□□ -0.21
TSPO-201ENST00000329563 HORMAD2Q8N7B1 307 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ANKS4BQ8N8V4 417 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 RFWD2Q8NHY2 731 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 QRFPRQ96P65 431 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 TMEM120AQ9BXJ8 343 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ACPTQ9BZG2 426 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 CHST11Q9NPF2 352 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 TCF7L2Q9NQB0 619 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 C1orf109Q9NX04 203 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 SLC12A4Q9UP95 1085 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 ARL2BPQ9Y2Y0 163 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 TMED5Q9Y3A6 229 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 CCL27Q9Y4X3 112 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 PCDHGB6Q9Y5F9 930 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 CACNA1CQ13936 2221 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
TSPO-201ENST00000329563 CSMD1Q96PZ7 3565 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 CDK2AP1O14519 115 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 SDHDO14521 159 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 PRMT3O60678 531 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 MYO1DO94832 1006 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 TGFB1P01137 390 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 RNH1P13489 461 aaKnown RBP13.72□□□□□ -0.21
TSPO-201ENST00000329563 LBPP18428 481 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 MAPK1P28482 360 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 PPP2R1BP30154 601 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 RPS13P62277 151 aaKnown RBP13.72□□□□□ -0.21
TSPO-201ENST00000329563 ACTN3Q08043 901 aaPredicted RBP13.72□□□□□ -0.21
TSPO-201ENST00000329563 SPIN4Q56A73 249 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 ZNF766Q5HY98 468 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 SPDYAQ5MJ70 313 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 KHDRBS2Q5VWX1 349 aaKnown RBP13.72□□□□□ -0.21
TSPO-201ENST00000329563 OGFOD2Q6N063 350 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 SCIMPQ6UWF3 145 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 Q6ZSR9 355 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 LARP4Q71RC2 724 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■■■□ 26.6
TSPO-201ENST00000329563 MAVSQ7Z434 540 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 SPATA19Q7Z5L4 167 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 FAM9CQ8IZT9 166 aa13.72□□□□□ -0.21
TSPO-201ENST00000329563 FAM98AQ8NCA5 519 aaKnown RBP13.72□□□□□ -0.21
TSPO-201ENST00000329563 GAL3ST3Q96A11 431 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms