RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 KLF10Q13118 480 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MPEG1Q2M385 716 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TRMT5Q32P41 509 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 AGKQ53H12 422 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 BLOC1S3Q6QNY0 202 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TMPRSS9Q7Z410 1059 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MRGPREQ86SM8 312 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 KRT73Q86Y46 540 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TICAM1Q8IUC6 712 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SFTPA2Q8IWL1 248 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 RIMKLAQ8IXN7 391 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 CMIPQ8IY22 773 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF527Q8NB42 609 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 CDC26Q8NHZ8 85 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TTC9Q92623 222 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SLC35G5Q96KT7 338 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SGCZQ96LD1 299 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 OR52E6Q96RD3 313 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SPSB2Q99619 263 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF717Q9BY31 904 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 DEFB126Q9BYW3 111 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 POLR2J2Q9GZM3 115 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 VN1R1Q9GZP7 353 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 POLR2J3Q9H1A7 115 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TUBB1Q9H4B7 451 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 DUSP22Q9NRW4 184 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 STOML1Q9UBI4 398 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 WASF3Q9UPY6 502 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ANGPT4Q9Y264 503 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SSUH2Q9Y2M2 353 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 KLHL20Q9Y2M5 609 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 A0A1W2PR48 441 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 HTR3EA5X5Y0 456 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 FRG2CA6NGY1 282 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 RFXANKO14593 260 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 TO15178 435 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 NRP2O60462 931 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 PGRP06401 933 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 NGFRP08138 427 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ABCB1P08183 1280 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 DRD5P21918 477 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 CHI3L1P36222 383 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 NCBP2P52298 156 aaKnown RBP eCLIP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 PGGT1BP53609 377 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 EEFSECP57772 596 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 SLC26A5P58743 744 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 RAE1P78406 368 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 FUT7Q11130 342 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 BNIP2Q12982 314 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 MYBPC3Q14896 1274 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 EIPR1Q53HC9 387 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 SFT2D3Q587I9 215 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 LRIF1Q5T3J3 769 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 B3GNTL1Q67FW5 361 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 PAPD4Q6PIY7 484 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 NUP54Q7Z3B4 507 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 OR4A15Q8NGL6 344 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 OR1N1Q8NGS0 311 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 APOBEC4Q8WW27 367 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 TSSK3Q96PN8 268 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 KCNA7Q96RP8 456 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ACTRT3Q9BYD9 372 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 SEMA4CQ9C0C4 833 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF385DQ9H6B1 395 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 HEY2Q9UBP5 337 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 SUCOQ9UBS9 1254 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 MARCOQ9UEW3 520 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 DCTN4Q9UJW0 460 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 KLK13Q9UKR3 277 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 CES1P1Q9UKY3 287 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 YARS2Q9Y2Z4 477 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 MRPS2Q9Y399 296 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 TMPRSS11DO60235 418 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 NTRK1P04629 796 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 G6PDP11413 515 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ATP6V1C1P21283 382 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 GPX3P22352 226 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 FKBP2P26885 142 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 TRHRP34981 398 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 PPICP45877 212 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 FOXA1P55317 472 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 SUMO3P55854 103 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 CLN3Q13286 438 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 DECR1Q16698 335 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF630Q2M218 657 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ABHD17BQ5VST6 288 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 C1orf189Q5VU69 101 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 CDC73Q6P1J9 531 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 HSDL2Q6YN16 418 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF793Q6ZN11 406 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 CCDC121Q6ZUS5 278 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 SLC34A3Q8N130 599 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 GOLM1Q8NBJ4 401 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 BBS10Q8TAM1 723 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 TMCO6Q96DC7 493 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 NSL1Q96IY1 281 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 LMF2Q9BU23 707 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 C1orf21Q9H246 121 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 C12orf65Q9H3J6 166 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 KLHL31Q9H511 634 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms