RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 GPR83Q9NYM4 423 aa20.26■□□□□ 0.83
LIMS2-201ENST00000324938 GOLGA4Q13439 2230 aaKnown RBP20.25■□□□□ 0.83
LIMS2-201ENST00000324938 CLDN25C9JDP6 229 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 MPZL2O60487 215 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 PRKRAO75569 313 aaKnown RBP20.25■□□□□ 0.83
LIMS2-201ENST00000324938 SERPINB10P48595 397 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 KHKP50053 298 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 SLAMF1Q13291 335 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 ZNF846Q147U1 533 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 FRMPD2BQ6IN97 320 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 SZRD1Q7Z422 152 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D19Q8N5T2 526 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 OR2L5Q8NG80 312 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 OR5D16Q8NGK9 328 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 OR8K5Q8NH50 307 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 SFXN5Q8TD22 340 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 BBS4Q96RK4 519 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 FBRSQ9HAH7 460 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 AKIP1Q9NQ31 210 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 SPHK1Q9NYA1 384 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 SCHIP1Q9P0W5 487 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-201ENST00000324938 HEBP2Q9Y5Z4 205 aa20.25■□□□□ 0.83
LIMS2-201ENST00000324938 M0R082 166 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 M0R129 80 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 FAAHO00519 579 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 KDM1AO60341 852 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 GUCY1B2O75343 617 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 NADKO95544 446 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 H1F0P07305 194 aaKnown RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 ATP5A1P25705 553 aaKnown RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 PPP2R1BP30154 601 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 IDUAP35475 653 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 LIPAP38571 399 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 HYAL1Q12794 435 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TOR1AIP1Q5JTV8 583 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 ATAT1Q5SQI0 421 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 IGFN1Q86VF2 1251 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 ACOT4Q8N9L9 421 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 OR4D11Q8NGI4 311 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 RPL3LQ92901 407 aaKnown RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 ABTB1Q969K4 478 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 LGALS12Q96DT0 336 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 MACROD1Q9BQ69 325 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 NKX2-4Q9H2Z4 354 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 HMG20AQ9NP66 347 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 MGAT4BQ9UQ53 548 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 PCDHGA4Q9Y5G9 962 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3DA0A087WVF3 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3IA0A087WXS9 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3EA0A087X179 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3KA0A087X1G2 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 A0A1W2PR48 441 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 SH3D21A4FU49 640 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3FA6NER0 549 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3LB9A6J9 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3HP0C7X1 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 CMPK1P30085 196 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 SEC23BQ15437 767 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TIGD6Q17RP2 521 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 DCST1Q5T197 706 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TMEM236Q5W0B7 351 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 PPP2R2DQ66LE6 453 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3GQ6DHY5 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3CQ6IPX1 549 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 DEF8Q6ZN54 512 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TBC1D3Q8IZP1 549 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 NLGN4XQ8N0W4 816 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TMEM145Q8NBT3 493 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 VANGL1Q8TAA9 524 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 XAGE5Q8WWM1 108 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 OR2M4Q96R27 311 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 WDR12Q9GZL7 423 aaKnown RBP20.24■□□□□ 0.83
LIMS2-201ENST00000324938 SEMA3GQ9NS98 782 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 TRPC4Q9UBN4 977 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 SLC6A14Q9UN76 642 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 ATG4BQ9Y4P1 393 aa20.24■□□□□ 0.83
LIMS2-201ENST00000324938 PRSS38A1L453 326 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 WASHC1A8K0Z3 465 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 STSP08842 583 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 NR2F1P10589 423 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 LRRC32Q14392 662 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 IRF3Q14653 427 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 ZNF425Q6IV72 752 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 WASH2PQ6VEQ5 465 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 KRT73Q86Y46 540 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 RBM45Q8IUH3 476 aaKnown RBP20.23■□□□□ 0.83
LIMS2-201ENST00000324938 STX19Q8N4C7 294 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 MFSD9Q8NBP5 474 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 S100ZQ8WXG8 99 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 BTBD2Q9BX70 525 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 UCK2Q9BZX2 261 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 MS4A12Q9NXJ0 267 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 REV1Q9UBZ9 1251 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 PMF1-BGLAPU3KQ54 211 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 MYO9BQ13459 2157 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 GLOD5A6NK44 160 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 EFCAB9A8MZ26 197 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 TOR1BO14657 336 aa20.23■□□□□ 0.83
LIMS2-201ENST00000324938 SLC31A1O15431 190 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms