RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 U3KQV3 271 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 ADAMTS9Q9P2N4 1935 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 PATE3B3GLJ2 98 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 PLOD2O00469 737 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 NUDT21O43809 227 aaKnown RBP17.33■□□□□ 0.37
USP39-201ENST00000323701 RASAL1O95294 804 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 CSF2RBP32927 897 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 BUD31P41223 144 aaPredicted RBP17.33■□□□□ 0.37
USP39-201ENST00000323701 RXRGP48443 463 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 PCBP3P57721 371 aaKnown RBP17.33■□□□□ 0.37
USP39-201ENST00000323701 NHSL2Q5HYW2 709 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 MANEAQ5SRI9 462 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 CA13Q8N1Q1 262 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 ZNF655Q8N720 491 aaPredicted RBP17.33■□□□□ 0.37
USP39-201ENST00000323701 COL26A1Q96A83 441 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 TCTN2Q96GX1 697 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 IL1RAPQ9NPH3 570 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 PHF11Q9UIL8 331 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 CSNK1G3Q9Y6M4 447 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 CCDC88CQ9P219 2028 aa17.33■□□□□ 0.37
USP39-201ENST00000323701 A0A0A6YYC8 382 aaPredicted RBP17.33■□□□□ 0.36
USP39-201ENST00000323701 I3L1I5 382 aaPredicted RBP17.33■□□□□ 0.36
USP39-201ENST00000323701 BCHEP06276 602 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 TFPTP0C1Z6 253 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 OR12D1P0DN82 309 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 DDX5P17844 614 aaKnown RBP17.33■□□□□ 0.36
USP39-201ENST00000323701 ARRB1P49407 418 aaPredicted RBP17.33■□□□□ 0.36
USP39-201ENST00000323701 XKP51811 444 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 RBBP4Q09028 425 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 MED21Q13503 144 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.33■□□□□ 0.36
USP39-201ENST00000323701 FKBP9P1Q75LS8 142 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 C7orf34Q96L11 122 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 BARD1Q99728 777 aaKnown RBP17.33■□□□□ 0.36
USP39-201ENST00000323701 C9orf16Q9BUW7 83 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 VCXQ9H320 206 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 OR51I1Q9H343 314 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 RPS6KA6Q9UK32 745 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 ZNF780BQ9Y6R6 833 aa17.33■□□□□ 0.36
USP39-201ENST00000323701 TLCD2A6NGC4 264 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 DENRO43583 198 aaKnown RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 FOXS1O43638 330 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 FGF17O60258 216 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 HMGN2P05204 90 aaKnown RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 GNSP15586 552 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 MPIP34949 423 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 MYBPC3Q14896 1274 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 LAPTM4AQ15012 233 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 SYPL1Q16563 259 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 ZNF630Q2M218 657 aaPredicted RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 WDR53Q7Z5U6 358 aaPredicted RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 SMYD1Q8NB12 490 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 MAGEE2Q8TD90 523 aaPredicted RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 ELP4Q96EB1 424 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 TMEM19Q96HH6 336 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 SOX17Q9H6I2 414 aaPredicted RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 LYRM4Q9HD34 91 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 SOHLH2Q9NX45 425 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 RAB26Q9ULW5 256 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 KCNE3Q9Y6H6 103 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 H0YJX3 145 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 SUV39H1O43463 412 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 GLB1P16278 677 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 PRKACGP22612 351 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 EPHA8P29322 1005 aaPredicted RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 OR1E2P47887 323 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 SEPHS1P49903 392 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 EPHA4P54764 986 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 LASP1Q14847 261 aaKnown RBP17.32■□□□□ 0.36
USP39-201ENST00000323701 HLA-BQ31612 363 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 SNAP47Q5SQN1 464 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 CCDC80Q76M96 950 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 OR7G2Q8NG99 324 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 ZFP28Q8NHY6 868 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 CNBD2Q96M20 576 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 RBCK1Q9BYM8 510 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 YIPF3Q9GZM5 350 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 RAD21L1Q9H4I0 556 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 EPHA6Q9UF33 1036 aa17.32■□□□□ 0.36
USP39-201ENST00000323701 OR2W5A6NFC9 320 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 GNAO1P09471 354 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 CD1CP29017 333 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 MLLT3P42568 568 aaPredicted RBP17.31■□□□□ 0.36
USP39-201ENST00000323701 SELENOWP63302 87 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 PDK3Q15120 406 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 SYT16Q17RD7 645 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 ZC3H12BQ5HYM0 836 aaKnown RBP17.31■□□□□ 0.36
USP39-201ENST00000323701 FAM111BQ6SJ93 734 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 METTL27Q8N6F8 245 aaPredicted RBP17.31■□□□□ 0.36
USP39-201ENST00000323701 OR4K14Q8NGD5 310 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 SLC35G5Q96KT7 338 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 ZNF285Q96NJ3 590 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 DOHHQ9BU89 302 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 SPRTNQ9H040 489 aaPredicted RBP17.31■□□□□ 0.36
USP39-201ENST00000323701 RUBCNLQ9H714 662 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 SMURF2Q9HAU4 748 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 A4GALTQ9NPC4 353 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 EQTNQ9NQ60 294 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 RAB23Q9ULC3 237 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 TMEM184BQ9Y519 407 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms