RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 KLHL22Q53GT1 634 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 DCST1Q5T197 706 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 ANXA8L1Q5VT79 327 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 BRAT1Q6PJG6 821 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 MRPL10Q7Z7H8 261 aaKnown RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 THOC6Q86W42 341 aaKnown RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 LIX1LQ8IVB5 337 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 OR4N4Q8N0Y3 316 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 BEST4Q8NFU0 473 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CEP76Q8TAP6 659 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 DNAJA4Q8WW22 397 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 ASB11Q8WXH4 323 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SLC9A6Q92581 669 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 OTUB1Q96FW1 271 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SENP5Q96HI0 755 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 WRAP53Q9BUR4 548 aaKnown RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SLC12A9Q9BXP2 914 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 B3GNT4Q9C0J1 378 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 DIABLOQ9NR28 239 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 NUDT15Q9NV35 164 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 EIF3KQ9UBQ5 218 aaKnown RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 BTNL2Q9UIR0 455 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 HCN2Q9UL51 889 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 NCKAP1Q9Y2A7 1128 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 NUPL2O15504 423 aaKnown RBP9.17□□□□□ -0.94
PTPRA-202ENST00000318266 PROM1O43490 865 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 PRMT3O60678 531 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 HCN1O60741 890 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 OAZ2O95190 189 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 GSTM1P09488 218 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 LHCGRP22888 699 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 PRPH2P23942 346 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 LIMS1P48059 325 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 SNTA1Q13424 505 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF770Q6IQ21 691 aaPredicted RBP9.17□□□□□ -0.94
PTPRA-202ENST00000318266 TMEM65Q6PI78 240 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 MARCH9Q86YJ5 346 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 LRRC17Q8N6Y2 441 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 OR8J1Q8NGP2 316 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 RIT1Q92963 219 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ART5Q96L15 291 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 MARVELD1Q9BSK0 173 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 TMEM43Q9BTV4 400 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 OR51B5Q9H339 312 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 C1GALT1Q9NS00 363 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ENOPH1Q9UHY7 261 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 NUP50Q9UKX7 468 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 MTMR11A4FU01 709 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ATP6V1G2-DDX39BF2Z307 99 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 COCHO43405 550 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 CHP2O43745 196 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ARHGEF15O94989 841 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 RAB36O95755 333 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ACADMP11310 421 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 CELP19835 753 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 CXCL3P19876 107 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 CSKP41240 450 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 SRP9P49458 86 aaKnown RBP9.17□□□□□ -0.94
PTPRA-202ENST00000318266 PPP3R1P63098 170 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 TAGLNQ01995 201 aaKnown RBP9.17□□□□□ -0.94
PTPRA-202ENST00000318266 RPL6Q02878 288 aaKnown RBP9.17□□□□□ -0.94
PTPRA-202ENST00000318266 RGS1Q08116 209 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 C2orf80Q0P641 193 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 SYT14P1Q58G82 188 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 MEDAGQ5VYS4 303 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 TRIM40Q6P9F5 258 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 GLB1LQ6UWU2 654 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 TMPRSS11BQ86T26 416 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 LILRA3Q8N6C8 439 aaPredicted RBP9.17□□□□□ -0.94
PTPRA-202ENST00000318266 SLC43A3Q8NBI5 491 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 OR52N2Q8NGI0 321 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 WDR20Q8TBZ3 569 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 CHTF18Q8WVB6 975 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 MVB12BQ9H7P6 319 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 SEMA3GQ9NS98 782 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF624Q9P2J8 865 aaPredicted RBP9.17□□□□□ -0.94
PTPRA-202ENST00000318266 SCML1Q9UN30 329 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 ING4Q9UNL4 249 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 GSTK1Q9Y2Q3 226 aa9.17□□□□□ -0.94
PTPRA-202ENST00000318266 TMEM202A6NGA9 273 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 C5orf58C9J3I9 102 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 TEX46H3BTG2 121 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 STC2O76061 302 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CH25HO95992 272 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 LALBAP00709 142 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 HRGP04196 525 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 FAM157BP0CG42 384 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 OR12D1P0DN82 309 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CPEP16870 476 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 PTNP21246 168 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 WNT4P56705 351 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 GINS1Q14691 196 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CLEC12AQ5QGZ9 265 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ACSM5Q6NUN0 579 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 TPGS1Q6ZTW0 290 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CHMP1BQ7LBR1 199 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF655Q8N720 491 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 DUSP18Q8NEJ0 188 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms