RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 KIR3DP1A8MWS1 328 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 LSM1O15116 133 aaKnown RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 AKAP10O43572 662 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 OR6B1O95007 311 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 IGKV3-11P04433 115 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 MLF1P58340 268 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 GPR85P60893 370 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 MGAT2Q10469 447 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 ASPHQ12797 758 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 NR6A1Q15406 480 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 MPEG1Q2M385 716 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF385BQ569K4 471 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 NOXRED1Q6NXP6 359 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.18□□□□□ -0.622e-17■■■■□ 19.6
SCFD1-201ENST00000311943 HAS2Q92819 552 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 KAT2AQ92830 837 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 TANKQ92844 425 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 KLHL29Q96CT2 875 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF681Q96N22 645 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 TSSK3Q96PN8 268 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 MS4A12Q9NXJ0 267 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 AHSPQ9NZD4 102 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 MCM8Q9UJA3 840 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 UTS2RQ9UKP6 389 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 PCDHGA10Q9Y5H3 936 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 SPACA6W5XKT8 324 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 SVILO95425 2214 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 OR5H15A6NDH6 313 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 OR10H2O60403 315 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 ICAM2P13598 275 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 CPMP14384 443 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 SDC1P18827 310 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 S1PR1P21453 382 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 NT5EP21589 574 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 TLX1P31314 330 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 CLCN2P51788 898 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 HK2P52789 917 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 RNF4P78317 190 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 SRSF1Q07955 248 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 C2orf80Q0P641 193 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF169Q14929 603 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 OR1C1Q15619 314 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 OR52E8Q6IFG1 317 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 WDR53Q7Z5U6 358 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 TICAM1Q8IUC6 712 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 PRR22Q8IZ63 422 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 GBP7Q8N8V2 638 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 OR4K14Q8NGD5 310 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 PPP1R14CQ8TAE6 165 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 SUN3Q8TAQ9 357 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 GRHL3Q8TE85 626 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 RIT1Q92963 219 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 CIDECQ96AQ7 238 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 SENP1Q9P0U3 644 aa11.18□□□□□ -0.62
SCFD1-201ENST00000311943 G3BP2Q9UN86 482 aaKnown RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 PPIEQ9UNP9 301 aaKnown RBP11.18□□□□□ -0.62
SCFD1-201ENST00000311943 DYTNA2CJ06 578 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 PINLYPA6NC86 204 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 HSPA4LO95757 839 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 CYC1P08574 325 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 FGF4P08620 206 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 KITP10721 976 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 GNLYP22749 145 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 PIK3R1P27986 724 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 SOX3P41225 446 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 SLC1A6P48664 564 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 ABCE1P61221 599 aaKnown RBP11.17□□□□□ -0.62
SCFD1-201ENST00000311943 RNFT1Q5M7Z0 435 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 IL20RBQ6UXL0 311 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 PAGE2Q7Z2X7 111 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 GALNTL5Q7Z4T8 443 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 ST13P4Q8IZP2 240 aaPredicted RBP11.17□□□□□ -0.62
SCFD1-201ENST00000311943 CLYBLQ8N0X4 340 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 MDS2Q8NDY4 140 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 OR9A2Q8NGT5 310 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 ADAMTS18Q8TE60 1221 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 MIB2Q96AX9 1013 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 VMP1Q96GC9 406 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 GAL3ST4Q96RP7 486 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 BRINP2Q9C0B6 783 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 CXorf21Q9HAI6 301 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 LRTM1Q9HBL6 345 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 SSU72Q9NP77 194 aaKnown RBP11.17□□□□□ -0.62
SCFD1-201ENST00000311943 DEPPQ9NTK1 212 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 LRFN1Q9P244 771 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 MID2Q9UJV3 735 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 ADAM29Q9UKF5 820 aa11.17□□□□□ -0.62
SCFD1-201ENST00000311943 UTP20O75691 2785 aaKnown RBP11.17□□□□□ -0.62
SCFD1-201ENST00000311943 C1orf226A1L170 272 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 J3QKU1 62 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 TM9SF1O15321 606 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 RSL1D1O76021 490 aaKnown RBP11.16□□□□□ -0.62
SCFD1-201ENST00000311943 SERPINE1P05121 402 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 RNF224P0DH78 156 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 HSD3B1P14060 373 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 PCSK2P16519 638 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 HSD3B2P26439 372 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 MST1P26927 711 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 ARFIP1P53367 373 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms