RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 IFT88Q13099 833 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 EBPQ15125 230 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF791Q3KP31 576 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 SGO1Q5FBB7 561 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 OR52E8Q6IFG1 317 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 BNC2Q6ZN30 1099 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 NCCRP1Q6ZVX7 275 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 GOLM1Q8NBJ4 401 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 OR2M7Q8NG81 312 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 OR52N2Q8NGI0 321 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 OR5L2Q8NGL0 311 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 L3HYPDHQ96EM0 354 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 C11orf24Q96F05 449 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 PHF12Q96QT6 1004 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 ELOVL6Q9H5J4 265 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 CXorf21Q9HAI6 301 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 COPS7AQ9UBW8 275 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 TBK1Q9UHD2 729 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 ERVK-11Q9UQG0 969 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 FREM3P0C091 2139 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 APCP25054 2843 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 ARHGAP10A1A4S6 786 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 G3V2L1 256 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 MLYCDO95822 493 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 CCL3P10147 92 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 CHN1P15882 459 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 S1PR1P21453 382 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 HTR6P50406 440 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF267Q14586 743 aaPredicted RBP18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 TEX35Q5T0J7 233 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 NDUFAF5Q5TEU4 345 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 RTL4Q6ZR62 310 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 DOLPP1Q86YN1 238 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 SELENOMQ8WWX9 145 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 TM4SF18Q96CE8 201 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 DMRTA2Q96SC8 542 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 PELOQ9BRX2 385 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 GSTO2Q9H4Y5 243 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 ZDHHC11Q9H8X9 412 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 PROK2Q9HC23 129 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 PRM3Q9NNZ6 103 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 SLC12A4Q9UP95 1085 aa18.31■□□□□ 0.52
PDZRN3-202ENST00000308537 MANBAO00462 879 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 SUPT7LO94864 414 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 GSTA1P08263 222 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 GRNP28799 593 aaKnown RBP18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 SSTR4P31391 388 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 DUSP2Q05923 314 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 MGAT2Q10469 447 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 FUT7Q11130 342 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 TTC19Q6DKK2 380 aaPredicted RBP18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 MRGPRGQ86SM5 289 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 TDRPQ86YL5 185 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF615Q8N8J6 731 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 CDYL2Q8N8U2 506 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 CHTF18Q8WVB6 975 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 RIT1Q92963 219 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 MAGED4Q96JG8 741 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 ART5Q96L15 291 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 SGCZQ96LD1 299 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 CNPPD1Q9BV87 410 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 WWTR1Q9GZV5 400 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 ANKZF1Q9H8Y5 726 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 MEMO1Q9Y316 297 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 PCDHA9Q9Y5H5 950 aa18.3■□□□□ 0.52
PDZRN3-202ENST00000308537 PHF3Q92576 2039 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 A0A1B0GTH9 108 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 G3V3Y1 287 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 UBFD1O14562 309 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 TFECO14948 347 aaPredicted RBP18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 PROCP04070 461 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 CPMP14384 443 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 TAC1P20366 129 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 RAE1P78406 368 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 DUSP8Q13202 625 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 ART3Q13508 389 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 RASA2Q15283 850 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 HYAL4Q2M3T9 481 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 EMC4Q5J8M3 183 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 CCNYL2Q5T2Q4 361 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 SLC48A1Q6P1K1 146 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 OPN5Q6U736 354 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF808Q8N4W9 903 aaPredicted RBP18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 C1orf52Q8N6N3 182 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 PAQR8Q8TEZ7 354 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 AGAP11Q8TF27 550 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 TTTY12Q9BZ98 90 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 ACPTQ9BZG2 426 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 WDR41Q9HAD4 459 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 AHSPQ9NZD4 102 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 SNX6Q9UNH7 406 aa18.29■□□□□ 0.52
PDZRN3-202ENST00000308537 CREBBPQ92793 2442 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 OR10H2O60403 315 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 FBXO45P0C2W1 286 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 CNR1P21554 472 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 DNASE1L1P49184 302 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 FOXA1P55317 472 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 RPTNQ6XPR3 784 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 RNF111Q6ZNA4 994 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 GPRIN3Q6ZVF9 776 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms