RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 DGCR6LQ9BY27 220 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 SLC6A14Q9UN76 642 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 PCDHGB3Q9Y5G1 929 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 FRYLO94915 3013 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 WDFY4Q6ZS81 3184 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 PRAMEF26H0Y7S4 382 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 FFAR1O14842 300 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 SLC16A6O15403 523 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 PROM1O43490 865 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 FOXD2O60548 495 aaPredicted RBP10.75□□□□□ -0.69
SCG2-201ENST00000305409 NR2F1P10589 423 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 DRD2P14416 443 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 NTSP30990 170 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 BMP8BP34820 402 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 ESRRGP62508 458 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 B3GNT6Q6ZMB0 384 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 DEF8Q6ZN54 512 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 ABI3BPQ7Z7G0 1075 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 LGI4Q8N135 537 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 GALNT15Q8N3T1 639 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 TBC1D19Q8N5T2 526 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 TSTD1Q8NFU3 115 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 OR5T3Q8NGG3 340 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 UTP15Q8TED0 518 aaKnown RBP10.75□□□□□ -0.69
SCG2-201ENST00000305409 NCSTNQ92542 709 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 RSC1A1Q92681 617 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 OR2A5Q96R48 311 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 TREX2Q9BQ50 279 aaPredicted RBP10.75□□□□□ -0.69
SCG2-201ENST00000305409 PHF7Q9BWX1 381 aaPredicted RBP10.75□□□□□ -0.69
SCG2-201ENST00000305409 TRNAU1APQ9NX07 287 aaKnown RBP10.75□□□□□ -0.69
SCG2-201ENST00000305409 PCOLCE2Q9UKZ9 415 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 COMMD3-BMI1R4GMX3 469 aa10.75□□□□□ -0.69
SCG2-201ENST00000305409 M0R3H8 397 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 SLC1A7O00341 560 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 TNFRSF10CO14798 259 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 MFN2O95140 757 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 ANGPTL1O95841 491 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 NDUFS1P28331 727 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 RABIFP47224 123 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 PPM1FP49593 454 aaPredicted RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 RNF144AP50876 292 aaPredicted RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 SFSWAPQ12872 951 aaKnown RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 NPRL3Q12980 569 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 C6orf132Q5T0Z8 1188 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 TMEM236Q5W0B7 351 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 CCDC80Q76M96 950 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 B3GNT8Q7Z7M8 397 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 ZG16BQ96DA0 208 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 GABARAPL1Q9H0R8 117 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 RAD21L1Q9H4I0 556 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 ACER3Q9NUN7 267 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 WSB2Q9NYS7 404 aaPredicted RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 ANKMY1Q9P2S6 941 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 CES1P1Q9UKY3 287 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 ENTPD4Q9Y227 616 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 FAM32AQ9Y421 112 aaKnown RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 SPTY2D1-AS1A0A0U1RR47 76 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 TRIM64CA6NLI5 447 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 AHCYL1O43865 530 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 KDM1AO60341 852 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 JRKO75564 520 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 MAP2K4P45985 399 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 MAZP56270 477 aaKnown RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 STXBP1P61764 594 aaKnown RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 YPEL5P62699 121 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCG2-201ENST00000305409 EPS8Q12929 822 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 RUNX2Q13950 521 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 ZBED5Q49AG3 693 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 XAF1Q6GPH4 301 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 SLC48A1Q6P1K1 146 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 FAHD1Q6P587 224 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 ZNF773Q6PK81 442 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 MEX3DQ86XN8 651 aaKnown RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 ARMC8Q8IUR7 673 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 SPARTQ8N0X7 666 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 GEMIN6Q8WXD5 167 aaKnown RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 ISOC1Q96CN7 298 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 EPYCQ99645 322 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 LHPPQ9H008 270 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 MIR1-1HGQ9H1L0 117 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 ACSS1Q9NUB1 689 aaPredicted RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 TUBA8Q9NY65 449 aaPredicted RBP10.74□□□□□ -0.69
SCG2-201ENST00000305409 ERVK-18Q9QC07 812 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 HS3ST3A1Q9Y663 406 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 CABIN1Q9Y6J0 2220 aa10.74□□□□□ -0.69
SCG2-201ENST00000305409 TRBV4-1A0A0J9YWV2 114 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 OR2A25A4D2G3 310 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 H0YGG7 62 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 ADAMDEC1O15204 470 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 FRS3O43559 492 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 TBX19O60806 448 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 LDB3O75112 727 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 CHRM4P08173 479 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 IGFBP1P08833 259 aaPredicted RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 ITGAMP11215 1152 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 CD247P20963 164 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 CD6P30203 668 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 XCR1P46094 333 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 IDH2P48735 452 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms