RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 OR2L2Q8NH16 312 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 GPN2Q9H9Y4 310 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 USP36Q9P275 1121 aaKnown RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 NAALAD2Q9Y3Q0 740 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TRAV6A0A075B6T7 132 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF850A8MQ14 1090 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ENSAO43768 121 aaKnown RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ADAP00813 363 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 KCNC1P48547 511 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 STC1P52823 247 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 FXYD4P59646 89 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 CCNJQ5T5M9 372 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM64Q6YI46 380 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PHTF2Q8N3S3 785 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 BANPQ8N9N5 519 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OR9A4Q8NGU2 314 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 S100PBPQ96BU1 408 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 HAVCR1Q96D42 359 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 APIPQ96GX9 242 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF578Q96N58 590 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 NAA11Q9BSU3 229 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ELK4P28324 431 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 GALNT2Q10471 571 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 CCDC80Q76M96 950 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 KIF18BQ86Y91 864 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ELMOD2Q8IZ81 293 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 MICU1Q9BPX6 476 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 CALHM2Q9HA72 323 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PRSS21Q9Y6M0 314 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 LCATP04180 440 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 CD97P48960 835 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 SPINT3P49223 89 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 DCDC1P59894 354 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 CDK10Q15131 360 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 NXPE4Q6UWF7 544 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ZDHHC24Q6UX98 284 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF572Q7Z3I7 529 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 COMTD1Q86VU5 262 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF641Q96N77 438 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TSGA13Q96PP4 275 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 GMLQ99445 158 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM121BQ9BXQ6 578 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ANKMY1Q9P2S6 941 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ERVK-19Q9WJR5 959 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 VSTM2BA6NLU5 285 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ANHXE9PGG2 379 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 H7C0S8 307 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SIGLEC6O43699 453 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 DBHP09172 617 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 RAB33AQ14088 237 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CYBRD1Q53TN4 286 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PYHIN1Q6K0P9 492 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 HMBOX1Q6NT76 420 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 XKRXQ6PP77 449 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PRICKLE2Q7Z3G6 844 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CMASQ8NFW8 434 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 MAFAQ8NHW3 353 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 THAP4Q8WY91 577 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 FBXL20Q96IG2 436 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 WACQ9BTA9 647 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 FBXO9Q9UK97 447 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SORCS3Q9UPU3 1222 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SH2B3Q9UQQ2 575 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 NOP16Q9Y3C1 178 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 RPLP0P05388 317 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 EBLN1P0CF75 366 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ETFAP13804 333 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 DNAJA1P31689 397 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 RORAP35398 523 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 BLMHQ13867 455 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 KLHL22Q53GT1 634 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 LDLRAD1Q5T700 205 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CES4AQ5XG92 561 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 KIAA0907Q7Z7F0 614 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PAQR7Q86WK9 346 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CGREF1Q99674 301 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CADM1Q9BY67 442 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF180Q9UJW8 692 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 RNF215Q9Y6U7 377 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 C3P01024 1663 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 A0A0A6YYH2 397 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 A6NJ64 397 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 OR2AT4A6NND4 320 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 AP1G1O43747 822 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 RCBTB2O95199 551 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PPP1R3DO95685 299 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PORP16435 677 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 POU3F2P20265 443 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 MAGEA11P43364 429 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SMSP52788 366 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CD83Q01151 205 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ELAVL3Q14576 367 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 FAM205BPQ63HN1 556 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 OR8H3Q8N146 312 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM68Q96MH6 324 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 LPAR4Q99677 370 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF442Q9H7R0 627 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CDH20Q9HBT6 801 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF355PQ9NSJ1 428 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms