RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CDK9P50750 372 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 CLNS1AP54105 237 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 STX1BP61266 288 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 HBA1P69905 142 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 SLC13A2Q13183 592 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 DUSP8Q13202 625 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 NSDHLQ15738 373 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 MINDY4Q4G0A6 757 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 TIGD2Q4W5G0 525 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 FHL5Q5TD97 284 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 FAAH2Q6GMR7 532 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 SLC2A7Q6PXP3 512 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 FAM111BQ6SJ93 734 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 KIRREL2Q6UWL6 708 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 DLEU7Q6UYE1 221 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 R3HCC1LQ7Z5L2 792 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 PPP1R32Q7Z5V6 425 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 VASH2Q86V25 355 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 ANKRD46Q86W74 232 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 MSRB3Q8IXL7 192 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 POU5F2Q8N7G0 328 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 GOT1L1Q8NHS2 421 aaPredicted RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 TSPEARQ8WU66 669 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 C8orf44Q96CB5 159 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 KLHL29Q96CT2 875 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 ERP27Q96DN0 273 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 OR52E6Q96RD3 313 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 CRB3Q9BUF7 120 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 ANKRA2Q9H9E1 313 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 WDR41Q9HAD4 459 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 CXorf21Q9HAI6 301 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 ACSS1Q9NUB1 689 aaPredicted RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 NXT1Q9UKK6 140 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 MAPRE3Q9UPY8 281 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 MRPS33Q9Y291 106 aaKnown RBP8.87□□□□□ -0.99
RFX3-201ENST00000302303 MAN2B2Q9Y2E5 1009 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 SPACA6W5XKT8 324 aa8.87□□□□□ -0.99
RFX3-201ENST00000302303 A0A1W2PRB8 838 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 MASP2O00187 686 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 NR5A2O00482 541 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 PDPK1O15530 556 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 NME6O75414 186 aaPredicted RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 DDAH2O95865 285 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 C6orf47O95873 294 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 HEXBP07686 556 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 COX4I1P13073 169 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 CSNK2A2P19784 350 aaPredicted RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 MMP11P24347 488 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 S100A3P33764 101 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 GALNSP34059 522 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 RPL3P39023 403 aaKnown RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 STT3AP46977 705 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 MAP4K2Q12851 820 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 SSPNQ14714 243 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 KRT72Q14CN4 511 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 PCOLCEQ15113 449 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 DPY19L1Q2PZI1 675 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 TRMT12Q53H54 448 aaKnown RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 ZNF628Q5EBL2 1059 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 TRPM8Q7Z2W7 1104 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 SNX32Q86XE0 403 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 ST13P4Q8IZP2 240 aaPredicted RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 IL22RA1Q8N6P7 574 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 ZNF321PQ8N8H1 164 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 ADCY4Q8NFM4 1077 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 OR7G2Q8NG99 324 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 OR9A2Q8NGT5 310 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 FBXO27Q8NI29 283 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 STARD8Q92502 1023 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 IMMP1LQ96LU5 166 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 CCDC115Q96NT0 180 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 PAIP1Q9H074 479 aaKnown RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 EPS8L2Q9H6S3 715 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 CXorf36Q9H7Y0 433 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 SEMA3GQ9NS98 782 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 FAM120CQ9NX05 1096 aaKnown RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 SLC25A37Q9NYZ2 338 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 MAT2BQ9NZL9 334 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 NTMQ9P121 344 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 GPN3Q9UHW5 284 aaPredicted RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 BTNL2Q9UIR0 455 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 PSME2Q9UL46 239 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 PPIEQ9UNP9 301 aaKnown RBP8.86□□□□□ -0.99
RFX3-201ENST00000302303 CAPN7Q9Y6W3 813 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 CROCCQ5TZA2 2017 aa8.86□□□□□ -0.99
RFX3-201ENST00000302303 IGHV1-45A0A0A0MS14 117 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CCDC154A6NI56 674 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CCT8L1PA6NM43 557 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 C1QTNF9BB2RNN3 333 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 FXYD1O00168 92 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 PLOD2O00469 737 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZZEF1O43149 2961 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CREG1O75629 220 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 PSMG1O95456 288 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CBX6O95503 412 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 IGKV3-11P04433 115 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CD63P08962 238 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 C1QTNF9P0C862 333 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms