RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 PRKRAO75569 313 aaKnown RBP13.37□□□□□ -0.27
SDC2-201ENST00000302190 GASTP01350 101 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 INHBBP09529 407 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 CBLBQ13191 982 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 NRARPQ7Z6K4 114 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 OR51G2Q8NGK0 314 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 PIK3R3Q92569 461 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 TM9SF2Q99805 663 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 MCUBQ9NWR8 336 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 NDUFAF4Q9P032 175 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 NUFIP1Q9UHK0 495 aaKnown RBP13.37□□□□□ -0.27
SDC2-201ENST00000302190 TRBV4-1A0A0J9YWV2 114 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 JRKO75564 520 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 SLITRK5O94991 958 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 GABARAPO95166 117 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 ADORA3P0DMS8 318 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
SDC2-201ENST00000302190 IMPA1P29218 277 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 GGT2P36268 569 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 PFN3P60673 137 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 SLC3A1Q07837 685 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 MICAQ29983 383 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 ZNF791Q3KP31 576 aaPredicted RBP13.37□□□□□ -0.27
SDC2-201ENST00000302190 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 IZUMO1Q8IYV9 350 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 METTL4Q8N3J2 472 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 CADM2Q8N3J6 435 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 OR52L1Q8NGH7 329 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 OR8K5Q8NH50 307 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 POP5Q969H6 163 aaKnown RBP13.37□□□□□ -0.27
SDC2-201ENST00000302190 TMEM80Q96HE8 168 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 KCTD7Q96MP8 289 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 CCDC115Q96NT0 180 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 SPATA5L1Q9BVQ7 753 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 PCM1Q15154 2024 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 LRRC72A6NJI9 287 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 CD8B2A6NJW9 211 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 C1QTNF3-AMACRE9PGA6 284 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 H7C0S8 307 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
SDC2-201ENST00000302190 DYRK3O43781 588 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 RHOP08100 348 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 CD8BP10966 210 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 CRISP3P54108 245 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 PNLIPRP1P54315 467 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 KCNC4Q03721 635 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 TGM3Q08188 693 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 KEAP1Q14145 624 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 CTF1Q16619 201 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 ZNF311Q5JNZ3 666 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 TIGD4Q8IY51 512 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 POF1BQ8WVV4 589 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 SMURF1Q9HCE7 757 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 MKLN1Q9UL63 735 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
SDC2-201ENST00000302190 AREL1O15033 823 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 ANKRD28O15084 1053 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 HTR1AP08908 422 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 PRKAR1AP10644 381 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 UBL4AP11441 157 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 CDH11P55287 796 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 WDR5P61964 334 aaKnown RBP13.36□□□□□ -0.27
SDC2-201ENST00000302190 SYPL1Q16563 259 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 FXNQ16595 210 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 ZNF805Q5CZA5 627 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 FRMPD2BQ6IN97 320 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 OR4K5Q8NGD3 323 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 TANKQ92844 425 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 TESCQ96BS2 214 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 NRTNQ99748 197 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 MAPKAP1Q9BPZ7 522 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 VN1R3Q9BXE9 311 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 ENPP4Q9Y6X5 453 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 SSNA1O43805 119 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 KLK8O60259 260 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 LAMP2P13473 410 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 HPGDP15428 266 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 NT5EP21589 574 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 IDSP22304 550 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 KELP23276 732 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 GPR4P46093 362 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 FCHO2Q0JRZ9 810 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 USP51Q70EK9 711 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 OR8H1Q8NGG4 311 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 GRHL3Q8TE85 626 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
SDC2-201ENST00000302190 BACE2Q9Y5Z0 518 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 PIKFYVEQ9Y2I7 2098 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 C2orf92A0A1B0GVN3 265 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 ABHD14A-ACY1A0A1B0GW23 586 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 A0A1W2PQL4 384 aaPredicted RBP13.36□□□□□ -0.27
SDC2-201ENST00000302190 K7ESM1 405 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 SLC16A6O15403 523 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 ADH1CP00326 375 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 TIMP1P01033 207 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms