RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CES1P1Q9UKY3 287 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 TCFL5Q9UL49 500 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 POLR3HQ9Y535 204 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 CORINQ9Y5Q5 1042 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 USH1CQ9Y6N9 552 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 SVILO95425 2214 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 HEATR5AQ86XA9 2040 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 COL6A6A6NMZ7 2263 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 PRRC2CQ9Y520 2896 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 A0A087WV48 116 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 PRAMEF27A3QJZ7 478 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 URADA6NGE7 173 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 GLOD5A6NK44 160 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 IDSB3KWA1 339 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 C21orf140B9A014 251 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ANKRD28O15084 1053 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 HDAC3O15379 428 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 NKX2-8O15522 239 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 RGS14O43566 566 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 FGF17O60258 216 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 DNAJA2O60884 412 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 B4GALT2O60909 372 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 PEX11AO75192 247 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ALOX12BO75342 701 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 SEC22BO75396 215 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 CREG1O75629 220 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 SNUPNO95149 360 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 KLK3P07288 261 aaPredicted RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 IL3P08700 152 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 BCKDHAP12694 445 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 RNH1P13489 461 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 ATF4P18848 351 aaPredicted RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 MAOAP21397 527 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 AGXTP21549 392 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 EPHA3P29320 983 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 PPP2R1BP30154 601 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 TSFMP43897 325 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 ZFP36L2P47974 494 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 DIO3P55073 304 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 TAS2R50P59544 299 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 RPL38P63173 70 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 IGLV3-21P80748 117 aaPredicted RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 ID2Q02363 134 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ACSM2AQ08AH3 577 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 PCOLCEQ15113 449 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 MPEG1Q2M385 716 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 AP5B1Q2VPB7 878 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ZNF750Q32MQ0 723 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 LSM12Q3MHD2 195 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 TUBB8Q3ZCM7 444 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ZNF385BQ569K4 471 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 SPIN4Q56A73 249 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 SPDYAQ5MJ70 313 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 TMEM198Q66K66 360 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ACSM2BQ68CK6 577 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 SLC6A19Q695T7 634 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 FAAH2Q6GMR7 532 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 NOXRED1Q6NXP6 359 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 TMEM205Q6UW68 189 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 EPGNQ6UW88 154 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 DGAT2L6Q6ZPD8 337 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 LARP4Q71RC2 724 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSX3-201ENST00000298396 ZAR1Q86SH2 424 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 GPR180Q86V85 440 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 NUDT13Q86X67 352 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 CRLF3Q8IUI8 442 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ARFGAP2Q8N6H7 521 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 SRFBP1Q8NEF9 429 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 OR2Y1Q8NGV0 311 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 CLHC1Q8NHS4 586 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 DNAJB14Q8TBM8 379 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 PIWIL2Q8TC59 973 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 STARD8Q92502 1023 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 TBC1D20Q96BZ9 403 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 FAR2Q96K12 515 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 MARK4Q96L34 752 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 OR1F2PQ96R84 312 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 WDR77Q9BQA1 342 aaPredicted RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 COPS7BQ9H9Q2 264 aaPredicted RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 C14orf105Q9NVL8 296 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 LYARQ9NX58 379 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 ASIC5Q9NY37 505 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 REV1Q9UBZ9 1251 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 ZNF282Q9UDV7 671 aaPredicted RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 BAIAP2L1Q9UHR4 511 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 CDC14AQ9UNH5 594 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 FARSAQ9Y285 508 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 PTRH2Q9Y3E5 179 aaKnown RBP5.53□□□□□ -1.52
SSX3-201ENST00000298396 HS3ST3B1Q9Y662 390 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 SPTA1P02549 2419 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 CHD6Q8TD26 2715 aa5.53□□□□□ -1.52
SSX3-201ENST00000298396 DNAJC13O75165 2243 aa5.52□□□□□ -1.53
SSX3-201ENST00000298396 LOC102723996A0A087X1L8 192 aa5.52□□□□□ -1.53
SSX3-201ENST00000298396 IGHV3-20A0A0C4DH32 117 aa5.52□□□□□ -1.53
SSX3-201ENST00000298396 A0A1W2PQ72 361 aa5.52□□□□□ -1.53
SSX3-201ENST00000298396 TCRBV16S1A1N1A0A5B0 115 aa5.52□□□□□ -1.53
SSX3-201ENST00000298396 SRRM3A6NNA2 597 aaPredicted RBP5.52□□□□□ -1.53
SSX3-201ENST00000298396 C9J4A7 227 aa5.52□□□□□ -1.53
SSX3-201ENST00000298396 POLR3GO15318 223 aaPredicted RBP5.52□□□□□ -1.53
SSX3-201ENST00000298396 KLK10O43240 276 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms