RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 MCATQ8IVS2 390 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SGPP2Q8IWX5 399 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 YAF2Q8IY57 180 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR10G2Q8NGC3 310 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR13D1Q8NGV5 346 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 MARC2Q969Z3 335 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 MGLLQ99685 303 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR51V1Q9H2C8 321 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PLEKHA3Q9HB20 300 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ASH2LQ9UBL3 628 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TBX22Q9Y458 520 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CPQQ9Y646 472 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NSG1P42857 185 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 KCNC3Q14003 757 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RBM39Q14498 530 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 DUSP7Q16829 419 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C2orf76Q3KRA6 126 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SCGB2B2Q4G0G5 96 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C10orf120Q5SQS8 335 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SIGIRRQ6IA17 410 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 MTFR2Q6P444 385 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 MPZL3Q6UWV2 235 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 DBX2Q6ZNG2 339 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CYS1Q717R9 158 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RNF44Q7L0R7 432 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 XYLT1Q86Y38 959 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 KIAA0319LQ8IZA0 1049 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR5B17Q8NGF7 314 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 FNDC9Q8TBE3 224 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 APH1BQ8WW43 257 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 EXTL1Q92935 676 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PYCR2Q96C36 320 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TSPAN10Q9H1Z9 355 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 POLD4Q9HCU8 107 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HELZP42694 1942 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C13orf42A0A1B0GVH6 325 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PRRG1O14668 218 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 GABRA5P31644 462 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HIST1H3AP68431 136 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RPL24P83731 157 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PSMG4Q5JS54 123 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 BCL2L15Q5TBC7 163 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 GPR153Q6NV75 609 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ARL9Q6T311 187 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NLGN1Q8N2Q7 840 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PHTF2Q8N3S3 785 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR56A1Q8NGH5 318 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR2AG1Q9H205 316 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CARS2Q9HA77 564 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 POPDC3Q9HBV1 291 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NCDNQ9UBB6 729 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 EXTL2Q9UBQ6 330 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PCDHGA1Q9Y5H4 931 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PLXNA1Q9UIW2 1896 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 LOC100509620A0A075B734 347 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF736B4DX44 427 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC1A7O00341 560 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 EEDO75530 441 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ITGAMP11215 1152 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PRSS3P35030 304 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RAG2P55895 527 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 MZT1Q08AG7 82 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 KCTD20Q7Z5Y7 419 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 LAS2Q8IYD9 372 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CHST13Q8NET6 341 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 P2RY13Q9BPV8 354 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ERVMER34-1Q9H9K5 563 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 IL17RBQ9NRM6 502 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 COPS7AQ9UBW8 275 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PCDHB7Q9Y5E2 793 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC22A7Q9Y694 548 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 KIDINS220Q9ULH0 1771 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NUP188Q5SRE5 1749 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 A0A0A6YYJ9 748 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 H3BMQ9 156 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PTAFRP25105 342 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 BSGP35613 385 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF84P51523 738 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CCINQ13939 588 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 GRIK4Q16099 956 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 FIGNL1Q6PIW4 674 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C4orf19Q8IY42 314 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 LGI2Q8N0V4 545 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PGBD3Q8N328 593 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HCAR2Q8TDS4 363 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PITHD1Q9GZP4 211 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C1GALT1Q9NS00 363 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 BTRCQ9Y297 605 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C3P01024 1663 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF236Q9UL36 1845 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TULP4Q9NRJ4 1543 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 E5RGE8 158 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ASGR1P07306 291 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CD34P28906 385 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ERVK-21P61565 698 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 FXNQ16595 210 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PROSER3Q2NL68 480 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC25A52Q3SY17 297 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 KDM8Q8N371 416 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SHC3Q92529 594 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms