RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 OR1E3Q8WZA6 343 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 HSPBAP1Q96EW2 488 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 SEMA3GQ9NS98 782 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 FKBP14Q9NWM8 211 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 TMCC3Q9ULS5 477 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 NCKAP1Q9Y2A7 1128 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 ATG4BQ9Y4P1 393 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 CCDC88CQ9P219 2028 aa22.66■■□□□ 1.22
TRIM54-201ENST00000296098 TRBV4-1A0A0J9YWV2 114 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 A0A1W2PR48 441 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 PRAMEF27A3QJZ7 478 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 CLCA1A8K7I4 914 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 ERAL1O75616 437 aaKnown RBP22.65■■□□□ 1.22
TRIM54-201ENST00000296098 AIFM1O95831 613 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 LCKP06239 509 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 CHRM5P08912 532 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-201ENST00000296098 NR2F1P10589 423 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 CERS1P27544 350 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 MLLT10P55197 1068 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 CDC42P60953 191 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 ADAM15Q13444 863 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 DEF8Q6ZN54 512 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 AMIGO1Q86WK6 493 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 SRFBP1Q8NEF9 429 aaKnown RBP22.65■■□□□ 1.22
TRIM54-201ENST00000296098 VANGL1Q8TAA9 524 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-201ENST00000296098 FNDC8Q8TC99 324 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 XAGE5Q8WWM1 108 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 LCN9Q8WX39 176 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 OR6C2Q9NZP2 312 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 SNX7Q9UNH6 387 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 ENTPD4Q9Y227 616 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 KLHL20Q9Y2M5 609 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 GPC6Q9Y625 555 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-201ENST00000296098 FAM227AF5H4B4 570 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 ADAP00813 363 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 GASTP01350 101 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 MAGEA8P43361 318 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 BMXP51813 675 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 NFATC4Q14934 902 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 TBCEQ15813 527 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-201ENST00000296098 ENPP7Q6UWV6 458 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 USP30Q70CQ3 517 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 KRT73Q86Y46 540 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 B4GALNT2Q8NHY0 566 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 DHRS1Q96LJ7 313 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 FTSJ1Q9UET6 329 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 FBXW2Q9UKT8 454 aa22.65■■□□□ 1.22
TRIM54-201ENST00000296098 PGRMC2O15173 223 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 EML2O95834 649 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 CDK1P06493 297 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 NDUFS1P28331 727 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 SLC19A1P41440 591 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 CTSKP43235 329 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 TSFMP43897 325 aaKnown RBP22.64■■□□□ 1.22
TRIM54-201ENST00000296098 ANXA11P50995 505 aaKnown RBP22.64■■□□□ 1.22
TRIM54-201ENST00000296098 C21orf59P57076 290 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 DLX2Q07687 328 aaPredicted RBP22.64■■□□□ 1.22
TRIM54-201ENST00000296098 HTR4Q13639 388 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 PTGES3Q15185 160 aaKnown RBP22.64■■□□□ 1.22
TRIM54-201ENST00000296098 TCEA2Q15560 299 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 TCTN3Q6NUS6 607 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 OR4E2Q8NGC2 313 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 GGHQ92820 318 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 SYNPO2LQ9H987 977 aa22.64■■□□□ 1.22
TRIM54-201ENST00000296098 hCG_2014768A0A024R1R8 64 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 ZAR1LA6NP61 321 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 SEMA7AO75326 666 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 OXSR1O95747 527 aaPredicted RBP22.64■■□□□ 1.21
TRIM54-201ENST00000296098 ELAVL4P26378 380 aaKnown RBP22.64■■□□□ 1.21
TRIM54-201ENST00000296098 NUDT6P53370 316 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 STXBP1P61764 594 aaKnown RBP22.64■■□□□ 1.21
TRIM54-201ENST00000296098 GPR19Q15760 415 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 BHLHB9Q6PI77 547 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 BBS10Q8TAM1 723 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 SUN3Q8TAQ9 357 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 NDNFQ8TB73 568 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 MIPOL1Q8TD10 442 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 CNRIP1Q96F85 164 aaPredicted RBP22.64■■□□□ 1.21
TRIM54-201ENST00000296098 WDR92Q96MX6 357 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 ITPAQ9BY32 194 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 AMBNQ9NP70 447 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 APOBEC3BQ9UH17 382 aaKnown RBP22.64■■□□□ 1.21
TRIM54-201ENST00000296098 CA5BQ9Y2D0 317 aa22.64■■□□□ 1.21
TRIM54-201ENST00000296098 MYO10Q9HD67 2058 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 M0R129 80 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 FAAHO00519 579 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 H1F0P07305 194 aaKnown RBP22.63■■□□□ 1.21
TRIM54-201ENST00000296098 CHMP24386 653 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 AK4P27144 223 aaPredicted RBP22.63■■□□□ 1.21
TRIM54-201ENST00000296098 TGFBR2P37173 567 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 CRISP1P54107 249 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 CRISP3P54108 245 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 RAB8AP61006 207 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 ANKDD1AQ495B1 522 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 TJAP1Q5JTD0 557 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 C18orf63Q68DL7 685 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 FAM92BQ6ZTR7 304 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 OR4D11Q8NGI4 311 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 SELENONQ9NZV5 590 aa22.63■■□□□ 1.21
TRIM54-201ENST00000296098 H0Y8X5 98 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms