RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 DISC1C4P0D8 188 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 DRD2P14416 443 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 Q6ZSR6 202 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 TOR1AIP2Q8NFQ8 470 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 PGAM5Q96HS1 289 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 ZNF317Q96PQ6 595 aaPredicted RBP16.52■□□□□ 0.23
SHANK1-201ENST00000293441 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 SDHDO14521 159 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 CKMT1AP12532 417 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 ENDOUP21128 410 aaKnown RBP16.52■□□□□ 0.23
SHANK1-201ENST00000293441 ELK4P28324 431 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 DSC1Q08554 894 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 UNC5DQ6UXZ4 953 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 GSKIPQ9P0R6 139 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 RNF6Q9Y252 685 aa16.52■□□□□ 0.23
SHANK1-201ENST00000293441 AK4P27144 223 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-201ENST00000293441 GJA5P36382 358 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 SLC27A4Q6P1M0 643 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 OR52B6Q8NGF0 335 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 OR13C3Q8NGS6 347 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 CASD1Q96PB1 797 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 FUZQ9BT04 418 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 FN3KQ9H479 309 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 PPM1BO75688 479 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 CLIC3O95833 236 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 HMGCLP35914 325 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 SNU13P55769 128 aaKnown RBP16.51■□□□□ 0.23
SHANK1-201ENST00000293441 WNT7BP56706 349 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 BNIP3Q12983 259 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 FADDQ13158 208 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 GRIN2CQ14957 1233 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 LRFN4Q6PJG9 635 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.51■□□□□ 0.23
SHANK1-201ENST00000293441 ABHD5Q8WTS1 349 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-201ENST00000293441 FXYD6-FXYD2A0A087WZ82 144 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 SH3PXD2BA1X283 911 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 GMPRP36959 345 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 KCTD18Q6PI47 426 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-201ENST00000293441 TAS1R1Q7RTX1 841 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 GPR137CQ8N3F9 429 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 CREB3L4Q8TEY5 395 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 FXYD6Q9H0Q3 95 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 A0A0U1RQS6 177 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 ACOT7O00154 380 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 CLDN2P57739 230 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 EIF5AP63241 154 aaKnown RBP16.51■□□□□ 0.23
SHANK1-201ENST00000293441 TCEAL1Q15170 157 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 SCML1Q9UN30 329 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 DHDHQ9UQ10 334 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 SH2B3Q9UQQ2 575 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 LRRC42Q9Y546 428 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 ANHXE9PGG2 379 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 PROZP22891 400 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 GPR4P46093 362 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 MANEALQ5VSG8 457 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 WDR20Q8TBZ3 569 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 MROQ9BYG7 248 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 FBXL3Q9UKT7 428 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 CDH10Q9Y6N8 788 aa16.51■□□□□ 0.23
SHANK1-201ENST00000293441 A6NL46 340 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 E2F3O00716 465 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 FLRT2O43155 660 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 TAS2R38P59533 333 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 CD83Q01151 205 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 PLEKHG7Q6ZR37 379 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 OR14L1PQ8NHC6 308 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 THAP6Q8TBB0 222 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 APOOQ9BUR5 198 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 BAIAP2Q9UQB8 552 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 VIRMAQ69YN4 1812 aaKnown RBP16.5■□□□□ 0.23
SHANK1-201ENST00000293441 CD72P21854 359 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 GGT2P36268 569 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 P2RY2P41231 377 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 C15orf39Q6ZRI6 1047 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 PSD4Q8NDX1 1056 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 OR5AR1Q8NGP9 310 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 SGTBQ96EQ0 304 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 TMEM184CQ9NVA4 438 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 GPRC5BQ9NZH0 403 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 hCG_1807616A0A1W2PRN6 198 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 A8MVJ9 347 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 HNRNPA0Q13151 305 aaKnown RBP16.5■□□□□ 0.23
SHANK1-201ENST00000293441 GLT8D1Q68CQ7 371 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 ATG5Q9H1Y0 275 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 HPF1Q9NWY4 346 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 TAS2R10Q9NYW0 307 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 DPP6P42658 865 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 CLCA4Q14CN2 919 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 CDK10Q15131 360 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 VMACQ2NL98 169 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 EMC10Q5UCC4 262 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 MEDAGQ5VYS4 303 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 LAS2Q8IYD9 372 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 C16orf78Q8WTQ4 265 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 SCRN2Q96FV2 425 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 ZNF701Q9NV72 531 aaPredicted RBP16.5■□□□□ 0.23
SHANK1-201ENST00000293441 EPHA6Q9UF33 1036 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 TYROBPO43914 113 aa16.5■□□□□ 0.23
SHANK1-201ENST00000293441 TPTEP56180 551 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms