RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PRAMEF27A3QJZ7 478 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 PRAMEF26H0Y7S4 382 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 SLC1A7O00341 560 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 IFNA14P01570 189 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 LSSP48449 732 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 RPP38P78345 283 aaKnown RBP16.95■□□□□ 0.3
CAPN1-201ENST00000279247 PHF10Q8WUB8 498 aaKnown RBP16.95■□□□□ 0.3
CAPN1-201ENST00000279247 GEMIN6Q8WXD5 167 aaKnown RBP16.95■□□□□ 0.3
CAPN1-201ENST00000279247 TREX2Q9BQ50 279 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-201ENST00000279247 ADAM29Q9UKF5 820 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 MRPS2Q9Y399 296 aaKnown RBP16.95■□□□□ 0.3
CAPN1-201ENST00000279247 KCNE3Q9Y6H6 103 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 ASXL3Q9C0F0 2248 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 ADAMDEC1O15204 470 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 AHCYL1O43865 530 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 IFNW1P05000 195 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 RGS1Q08116 209 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 CDK5R2Q13319 367 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 PUM1Q14671 1186 aaKnown RBP eCLIP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 RFX4Q33E94 735 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 GPAT3Q53EU6 434 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 BROXQ5VW32 411 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 LAIR1Q6GTX8 287 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 CSF3RQ99062 836 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 CAPN10Q9HC96 672 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 PAK1IP1Q9NWT1 392 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 TRNAU1APQ9NX07 287 aaKnown RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 TMEM247A6NEH6 219 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 M0R3H8 397 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 GADD45GO95257 159 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 DRD2P14416 443 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 PCBP3P57721 371 aaKnown RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 NPRL3Q12980 569 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 EIF2B5Q13144 721 aaKnown RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 ADPRMQ3LIE5 342 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 KIAA0895LQ68EN5 471 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 PIWIL3Q7Z3Z3 882 aaKnown RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 ARMC8Q8IUR7 673 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 PROX1Q92786 737 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 EVA1BQ9NVM1 165 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 ANKMY1Q9P2S6 941 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 A6NCN8 305 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 RNF144AP50876 292 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 SMAD2Q15796 467 aaKnown RBP16.94■□□□□ 0.3
CAPN1-201ENST00000279247 ZNF773Q6PK81 442 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 GPR32P1Q8NGA4 272 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 OR5T3Q8NGG3 340 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 SUN3Q8TAQ9 357 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 ASB12Q8WXK4 309 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 RSC1A1Q92681 617 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 PRR14Q9BWN1 585 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 TRPV5Q9NQA5 729 aa16.94■□□□□ 0.3
CAPN1-201ENST00000279247 TFPTP0C1Z6 253 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 CPN2P22792 545 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 RABIFP47224 123 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 LIM2P55344 173 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 TDGQ13569 410 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 ZBED5Q49AG3 693 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 CRB2Q5IJ48 1285 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 TMEM236Q5W0B7 351 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 SLC22A18Q96BI1 424 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 ISOC1Q96CN7 298 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 HCRTR1O43613 425 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 UGT2B11O75310 529 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 HTR1AP08908 422 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 CSNK2A2P19784 350 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-201ENST00000279247 RGS19P49795 217 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 FZD2Q14332 565 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 FCRL6Q6DN72 434 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 LACC1Q8IV20 430 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 CCDC71Q8IV32 467 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-201ENST00000279247 FAM81AQ8TBF8 368 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 HDAC2Q92769 488 aaKnown RBP16.93■□□□□ 0.3
CAPN1-201ENST00000279247 POP5Q969H6 163 aaKnown RBP16.93■□□□□ 0.3
CAPN1-201ENST00000279247 C12orf43Q96C57 262 aaKnown RBP16.93■□□□□ 0.3
CAPN1-201ENST00000279247 RBCK1Q9BYM8 510 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 VCX3AQ9NNX9 186 aa16.93■□□□□ 0.3
CAPN1-201ENST00000279247 USP36Q9P275 1121 aaKnown RBP16.93■□□□□ 0.3
CAPN1-201ENST00000279247 TNFRSF10CO14798 259 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 PROM1O43490 865 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 FRS3O43559 492 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 TRMUO75648 421 aaKnown RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 CTSBP07858 339 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 CHRNB1P11230 501 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 BUD31P41223 144 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 RPS15AP62244 130 aaKnown RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 YPEL5P62699 121 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 SRSF5Q13243 272 aaKnown RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 MAPK11Q15759 364 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 C6orf132Q5T0Z8 1188 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 B3GNT8Q7Z7M8 397 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 SRFBP1Q8NEF9 429 aaKnown RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 EPYCQ99645 322 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 ACSS1Q9NUB1 689 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 GIMAP4Q9NUV9 329 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 TUBA8Q9NY65 449 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 ERVK-18Q9QC07 812 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 SNX5Q9Y5X3 404 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 ZNF780BQ9Y6R6 833 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms