RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KANSL1LA0AUZ9 987 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TMEM129A0AVI4 362 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TMEM89A2RUT3 159 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TTC34A8MYJ7 566 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 MCIDASD6RGH6 385 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 HAS3O00219 553 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 FOXE1O00358 373 aaPredicted RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 ABCD4O14678 606 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 KLF11O14901 512 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 INPPL1O15357 1258 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 SPRY2O43597 315 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 LCMT2O60294 686 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 LRP3O75074 770 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ZNF217O75362 1048 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ACSL3O95573 720 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 LYNP07948 512 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ACAA1P09110 424 aaPredicted RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 CDK4P11802 303 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 PPP3CBP16298 524 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 DPP4P27487 766 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 PIK3R1P27986 724 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 GABRA5P31644 462 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 PTGER1P34995 402 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 GRIA3P42263 894 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 CDX1P47902 265 aaPredicted RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 POU3F4P49335 361 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 CSNK1EP49674 416 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 AGTR2P50052 363 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 CCT8P50990 548 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 DAOAP59103 153 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 SIM1P81133 766 aaPredicted RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 CCZ1BP86790 482 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 CCZ1P86791 482 aaPredicted RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 PPIDQ08752 370 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 MERTKQ12866 999 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ZNF169Q14929 603 aaPredicted RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 USF2Q15853 346 aaPredicted RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 ME3Q16798 604 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TATDN3Q17R31 274 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TCTN1Q2MV58 587 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 POM121L1PQ3SYA9 428 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 SMUG1Q53HV7 270 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 CELF3Q5SZQ8 465 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 MLIPQ5VWP3 458 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 PLCXD3Q63HM9 321 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 SPECC1LQ69YQ0 1117 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ASPHD2Q6ICH7 369 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 SLC25A25Q6KCM7 469 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TTC27Q6P3X3 843 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 CBLN3Q6UW01 205 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 KYAT3Q6YP21 454 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 EIF3MQ7L2H7 374 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 LINC00523Q86TU6 105 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 STHQ8IWL8 128 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 LAS2Q8IYD9 372 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 FNDC5Q8NAU1 212 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 OR13F1Q8NGS4 319 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ZNF461Q8TAF7 563 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 WDR20Q8TBZ3 569 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ATG4AQ8WYN0 398 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TFAP2BQ92481 460 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 KIFAP3Q92845 792 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 RAB1CQ92928 201 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 TOP1MTQ969P6 601 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 FKBP10Q96AY3 582 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 RSPRY1Q96DX4 576 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 RBM41Q96IZ5 413 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 SLITRK1Q96PX8 696 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ALS2CR12Q96Q35 445 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 DDOQ99489 341 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 MTERF1Q99551 399 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 C17orf62Q9BQA9 187 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 CHRDL1Q9BU40 450 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ANKRD60Q9BZ19 345 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 HDHD2Q9H0R4 259 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 LRRC4Q9HBW1 653 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 SGK2Q9HBY8 427 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 MRPL47Q9HD33 250 aaKnown RBP4.28□□□□□ -1.72
CD44-202ENST00000278385 Q9N2J8 555 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 MYNNQ9NPC7 610 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 ARL15Q9NXU5 204 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 GRHL1Q9NZI5 618 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 SEC14L3Q9UDX4 400 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 AMFRQ9UKV5 643 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 STAP1Q9ULZ2 295 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 MYH7P12883 1935 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PDE4DIPQ5VU43 2346 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 HTTP42858 3142 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 A0A1W2PPV4 95 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 TMEM8BA6NDV4 472 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 TMEM247A6NEH6 219 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 NEMP2A6NFY4 417 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PSMD3O43242 534 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 NME2P1O60361 137 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PRAF2O60831 178 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MYO1DO94832 1006 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 ZFPL1O95159 310 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms