RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 UMODL1-AS1Q8N2C9 162 aa12.21□□□□□ -0.46
HERC6-202ENST00000273960 FOPNLQ96NB1 174 aa12.21□□□□□ -0.46
HERC6-202ENST00000273960 FAM124BQ9H5Z6 455 aaPredicted RBP12.21□□□□□ -0.46
HERC6-202ENST00000273960 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.46
HERC6-202ENST00000273960 CLCA2Q9UQC9 943 aa12.21□□□□□ -0.46
HERC6-202ENST00000273960 PCDHB7Q9Y5E2 793 aa12.21□□□□□ -0.46
HERC6-202ENST00000273960 WDR90Q96KV7 1748 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 MGAT4DA6NG13 374 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 SGTAO43765 313 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ALDOBP05062 364 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ATF6P18850 670 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 HMGCLP35914 325 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 MRPL19P49406 292 aaKnown RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 TPMTP51580 245 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 XKP51811 444 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 MAP4K2Q12851 820 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 TNFAIP8L2Q6P589 184 aaPredicted RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 PRSS55Q6UWB4 352 aaPredicted RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 HERVK_113Q902F9 699 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 CIDECQ96AQ7 238 aaPredicted RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 USB1Q9BQ65 265 aaKnown RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 SEC22CQ9BRL7 303 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 TMEM43Q9BTV4 400 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 OR51J1Q9H342 316 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ACER3Q9NUN7 267 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 SDHAF2Q9NX18 166 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 CRLS1Q9UJA2 301 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 DIMT1Q9UNQ2 313 aaKnown RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 GSTK1Q9Y2Q3 226 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 CDH10Q9Y6N8 788 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 SHISA3A0PJX4 238 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ATG13O75143 517 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 CBX7O95931 251 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ELK1P19419 428 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 MAZP56270 477 aaKnown RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 MLLT1Q03111 559 aaPredicted RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 SFRP4Q6FHJ7 346 aaPredicted RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 ZNF730Q6ZMV8 503 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ESPNLQ6ZVH7 1005 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 SAMD12Q8N8I0 201 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 OR52E4Q8NGH9 312 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 NLNQ9BYT8 704 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 LIN7BQ9HAP6 207 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 RPS10-NUDT3A0A1W2PQS6 291 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 PRKYO43930 277 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 SLC43A1O75387 559 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 C6orf47O95873 294 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ACVR1Q04771 509 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 TAF10Q12962 218 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 GRIN2CQ14957 1233 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 HEPACAMQ14CZ8 416 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 TAF1AQ15573 450 aaPredicted RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 TTLL9Q3SXZ7 439 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 FAM27D1Q5T7N8 215 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 ALG1LQ6GMV1 187 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 KIAA1161Q6NSJ0 714 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 C1orf52Q8N6N3 182 aaKnown RBP12.2□□□□□ -0.46
HERC6-202ENST00000273960 ZNF527Q8NB42 609 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 KLHL15Q96M94 604 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 DDOQ99489 341 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 HEXA-AS1Q9H8Q6 139 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 FLVCR2Q9UPI3 526 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
HERC6-202ENST00000273960 MT-ND4P03905 459 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 GLAP06280 429 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 TPOP07202 933 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 NR2F6P10588 404 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 CKBP12277 381 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 GPX2P18283 190 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 RHCEP18577 417 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 RPL9P32969 192 aaKnown RBP12.19□□□□□ -0.46
HERC6-202ENST00000273960 STK19P49842 368 aaPredicted RBP12.19□□□□□ -0.46
HERC6-202ENST00000273960 GNA13Q14344 377 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 GPR139Q6DWJ6 353 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 RAET1GQ6H3X3 334 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 TECPR1Q7Z6L1 1165 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 OR8D4Q8NGM9 314 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 AP3S1Q92572 193 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 RAB8BQ92930 207 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 GCDHQ92947 438 aaPredicted RBP12.19□□□□□ -0.46
HERC6-202ENST00000273960 C1orf74Q96LT6 269 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 GPR137Q96N19 417 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 SLC6A18Q96N87 628 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 WDFY2Q96P53 400 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 ACBD6Q9BR61 282 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 PIGUQ9H490 435 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 NDUFB11Q9NX14 153 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 MAB21L2Q9Y586 359 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 PCDHB11Q9Y5F2 797 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 PLXNA1Q9UIW2 1896 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 PIKFYVEQ9Y2I7 2098 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 ANXA4P09525 319 aaPredicted RBP12.19□□□□□ -0.46
HERC6-202ENST00000273960 PTGER1P34995 402 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 CSKP41240 450 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 WNT3P56703 355 aa12.19□□□□□ -0.46
HERC6-202ENST00000273960 CAP1Q01518 475 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms