RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 UCN3Q969E3 161 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 MOAP1Q96BY2 351 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 SMIM10Q96HG1 83 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 ZNF347Q96SE7 839 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 LRRC61Q9BV99 259 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 GABARAPL1Q9H0R8 117 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 ADNPQ9H2P0 1102 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 REEP1Q9H902 201 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 GPN2Q9H9Y4 310 aaPredicted RBP14.47□□□□□ -0.09
SF3B4-201ENST00000271628 SMURF2Q9HAU4 748 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 DNAAF2Q9NVR5 837 aaKnown RBP14.47□□□□□ -0.09
SF3B4-201ENST00000271628 MS4A12Q9NXJ0 267 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 PHF11Q9UIL8 331 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 PCDHGA8Q9Y5G5 932 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 DNAH14Q0VDD8 3507 aa14.47□□□□□ -0.09
SF3B4-201ENST00000271628 GOLGA4Q13439 2230 aaKnown RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 B4GAT1O43505 415 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 HS6ST1O60243 411 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 ZNF888P0CJ79 500 aaPredicted RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 ITGA2P17301 1181 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 CSNK2A2P19784 350 aaPredicted RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 MATN1P21941 496 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 ANXA11P50995 505 aaKnown RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 TPD52P55327 224 aaPredicted RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 ZC3H12BQ5HYM0 836 aaKnown RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 GKN2Q86XP6 184 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 HS3ST5Q8IZT8 346 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 HORMAD2Q8N7B1 307 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 RNF217Q8TC41 542 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 SPPL2AQ8TCT8 520 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 SERINC2Q96SA4 455 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 MBOAT4Q96T53 435 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 TMEM121BQ9BXQ6 578 aaPredicted RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 RUBCNLQ9H714 662 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 PRDM9Q9NQV7 894 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 CES1P1Q9UKY3 287 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 ZNF780BQ9Y6R6 833 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 A0A1W2PR77 199 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 OR5K3A6NET4 321 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 GLOD5A6NK44 160 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 TMEM229AB2RXF0 380 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 TLR4O00206 839 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 PDE9AO76083 593 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 INHBBP09529 407 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 NME1P15531 152 aaKnown RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 PPP1R8Q12972 351 aaKnown RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 IL18R1Q13478 541 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 TP53BP2Q13625 1128 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 CEBPEQ15744 281 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 IQCCQ4KMZ1 466 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 C18orf63Q68DL7 685 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 Q6ZNX1 250 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 SAMD14Q8IZD0 417 aaPredicted RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 SPARTQ8N0X7 666 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 SFXN5Q8TD22 340 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 MAPKAP1Q9BPZ7 522 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 AMBRA1Q9C0C7 1298 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 NAA50Q9GZZ1 169 aaKnown RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 ZCCHC3Q9NUD5 404 aaKnown RBP14.46□□□□□ -0.09
SF3B4-201ENST00000271628 PCDHGB3Q9Y5G1 929 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 SLCO1B1Q9Y6L6 691 aa14.46□□□□□ -0.09
SF3B4-201ENST00000271628 ADAMDEC1O15204 470 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 PXNP49023 591 aaPredicted RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 RPL6Q02878 288 aaKnown RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 TNFAIP8L2Q6P589 184 aaPredicted RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SMYD1Q8NB12 490 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 CHDHQ8NE62 594 aaPredicted RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SLC38A5Q8WUX1 472 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 RASSF5Q8WWW0 418 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 TAMM41Q96BW9 452 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 CNRIP1Q96F85 164 aaPredicted RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SLC35G5Q96KT7 338 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SPACA7Q96KW9 195 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 EPYCQ99645 322 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 PALMDQ9NP74 551 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 FAIMQ9NVQ4 179 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 DOLKQ9UPQ8 538 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SAMHD1Q9Y3Z3 626 aaKnown RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SNX11Q9Y5W9 270 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 LOC100130705A0A1B0GUX0 176 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 B4DGG1 531 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 STK25O00506 426 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 AXIN1O15169 862 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SLC16A6O15403 523 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 B3GALT2O43825 422 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 PRKRAO75569 313 aaKnown RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 BCL10O95999 233 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 OPN1SWP03999 348 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 WNT1P04628 370 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 TFPTP0C1Z6 253 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 NR2F6P10588 404 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 PRKACGP22612 351 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 TLX1P31314 330 aaPredicted RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 PRR5P85299 388 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 KCNAB2Q13303 367 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SIM2Q14190 667 aaPredicted RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 GTF2IRD2BQ6EKJ0 949 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SLC36A4Q6YBV0 504 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 RNF44Q7L0R7 432 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 GTF2IRD2Q86UP8 949 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms