RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ZNF630Q2M218 657 aaPredicted RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 TBCELQ5QJ74 424 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 YOD1Q5VVQ6 348 aaPredicted RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 TMEM102Q8N9M5 508 aaPredicted RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 TMEM52Q8NDY8 209 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 OR56A1Q8NGH5 318 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 TBC1D20Q96BZ9 403 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 ELP4Q96EB1 424 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 PKP2Q99959 881 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 ASPSCR1Q9BZE9 553 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 CUTCQ9NTM9 273 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 ZCCHC3Q9NUD5 404 aaKnown RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 THUMPD1Q9NXG2 353 aaKnown RBP13.27□□□□□ -0.29
SS18-201ENST00000269137 SERTAD3Q9UJW9 196 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 CLCA2Q9UQC9 943 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 SCN2AQ99250 2005 aa13.27□□□□□ -0.29
SS18-201ENST00000269137 FAM227AF5H4B4 570 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 PLOD2O00469 737 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 EMC8O43402 210 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 FHP07954 510 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 IFI6P09912 130 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 ARAFP10398 606 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 FCGR1AP12314 374 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 PPP2R1BP30154 601 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 ITGA1P56199 1179 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 DSTNP60981 165 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 TXNL4AP83876 142 aaKnown RBP13.26□□□□□ -0.29
SS18-201ENST00000269137 PRR5P85299 388 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 FOLH1Q04609 750 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 FAM98BQ52LJ0 330 aaKnown RBP13.26□□□□□ -0.29
SS18-201ENST00000269137 ERMP1Q7Z2K6 904 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 SLC30A8Q8IWU4 369 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 GPR135Q8IZ08 494 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 OR9A2Q8NGT5 310 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 ZNF501Q96CX3 271 aaPredicted RBP13.26□□□□□ -0.29
SS18-201ENST00000269137 FANCEQ9HB96 536 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 C3orf14Q9HBI5 128 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 FGF21Q9NSA1 209 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 MRPS33Q9Y291 106 aaKnown RBP13.26□□□□□ -0.29
SS18-201ENST00000269137 RALGAPA1Q6GYQ0 2036 aa13.26□□□□□ -0.29
SS18-201ENST00000269137 IGHV5-10-1A0A0J9YXX1 117 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 LNP1A1A4G5 178 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 PRR33A8MZF0 331 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 FGF17O60258 216 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 SLITRK5O94991 958 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 SERPINA1P01009 418 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ATP1B1P05026 303 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 RAP2AP10114 183 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 CASP9P55211 416 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ACY1Q03154 408 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 CHRNB3Q05901 458 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 TP53BP2Q13625 1128 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 INTS11Q5TA45 600 aaKnown RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 OGFRL1Q5TC84 451 aaPredicted RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 CEACAM20Q6UY09 585 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 MED25Q71SY5 747 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 CCDC80Q76M96 950 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ZNF595Q8IYB9 648 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 SHISA5Q8N114 240 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 HORMAD2Q8N7B1 307 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 MIPOL1Q8TD10 442 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 LRTOMTQ8WZ04 291 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 MAL2Q969L2 176 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ANKRD9Q96BM1 317 aaPredicted RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 MMABQ96EY8 250 aaPredicted RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 VCX3BQ9H321 246 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 MAGIXQ9H6Y5 334 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 A4GALTQ9NPC4 353 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 HCN3Q9P1Z3 774 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 RPS6KA6Q9UK32 745 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 CDC14AQ9UNH5 594 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 SAMD4AQ9UPU9 718 aaKnown RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 MYO15AQ9UKN7 3530 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ADAMTS20P59510 1910 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 NTN3O00634 580 aaPredicted RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 FLRT2O43155 660 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ZNF749O43361 778 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 PEX1O43933 1283 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 TIPRLO75663 272 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 PRKD3O94806 890 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 CKMT2P17540 419 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 FASP25445 335 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ANXA11P50995 505 aaKnown RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 ARSFP54793 590 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 CDK6Q00534 326 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 COL9A2Q14055 689 aaPredicted RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 SCARB2Q14108 478 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ELOAQ14241 798 aaKnown RBP13.25□□□□□ -0.29
SS18-201ENST00000269137 TRIP10Q15642 601 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 ENPP6Q6UWR7 440 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 TMEM107Q6UX40 140 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 FBXO30Q8TB52 745 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 FAM110BQ8TC76 370 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 PYURFQ96I23 114 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 SLC35G5Q96KT7 338 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 SEPHS2Q99611 448 aa13.25□□□□□ -0.29
SS18-201ENST00000269137 NDC1Q9BTX1 674 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms