RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 TRIM55Q9BYV6 548 aa12.51□□□□□ -0.41
PDCD6-201ENST00000264933 SLAMF7Q9NQ25 335 aa12.51□□□□□ -0.41
PDCD6-201ENST00000264933 PPIEQ9UNP9 301 aaKnown RBP12.51□□□□□ -0.41
PDCD6-201ENST00000264933 SCAMP2O15127 329 aaKnown RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 CELA2AP08217 269 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 CT62P0C5K7 136 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 SLC35E2P0CK97 266 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 CPMP14384 443 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 CD1EP15812 388 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 PIK3R1P27986 724 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 GALNSP34059 522 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 FRKP42685 505 aaPredicted RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 ALDH9A1P49189 494 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 MRPL19P49406 292 aaKnown RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 UFM1P61960 85 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 PHC1P78364 1004 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 STX4Q12846 297 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 SF3A3Q12874 501 aaKnown RBP eCLIP12.5□□□□□ -0.414e-8■■■■□ 23.8
PDCD6-201ENST00000264933 SERTAD2Q14140 314 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 NXNQ6DKJ4 435 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 PAPD4Q6PIY7 484 aaKnown RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 ST13P4Q8IZP2 240 aaPredicted RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 OR7A2PQ8NGA2 310 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 C10orf82Q8WW14 230 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 THAP4Q8WY91 577 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 EXOSC8Q96B26 276 aaKnown RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 COQ8BQ96D53 544 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 MTERF3Q96E29 417 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 MARK4Q96L34 752 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 IP6K3Q96PC2 410 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 SIKE1Q9BRV8 207 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 TMEM120AQ9BXJ8 343 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 ZNF385DQ9H6B1 395 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 SLC35C2Q9NQQ7 365 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 KLHL14Q9P2G3 628 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 C19orf25Q9UFG5 118 aaPredicted RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 ZNF223Q9UK11 482 aaPredicted RBP12.5□□□□□ -0.41
PDCD6-201ENST00000264933 FBXL4Q9UKA2 621 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 UTS2RQ9UKP6 389 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 POLHQ9Y253 713 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 KCNMB2Q9Y691 235 aa12.5□□□□□ -0.41
PDCD6-201ENST00000264933 MAST4O15021 2626 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 GMNCA6NCL1 334 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ARGFXA6NJG6 315 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 CYSRT1A8MQ03 144 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 E9PBE3 544 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 HRKO00198 91 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 UBDO15205 165 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 KLHL41O60662 606 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 SCN2BO60939 215 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ERAL1O75616 437 aaKnown RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 SEC24DO94855 1032 aaPredicted RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 HPP00738 406 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 CLPSP04118 112 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 PORP16435 677 aaPredicted RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 S1PR1P21453 382 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 PTGER1P34995 402 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 FEN1P39748 380 aaKnown RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 WNT3P56703 355 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 SOX8P57073 446 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ACTN3Q08043 901 aaPredicted RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ELAVL1Q15717 326 aaKnown RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 DEFB109BQ30KR1 87 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 PDCD4Q53EL6 469 aaKnown RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 DCAF10Q5QP82 559 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ACAD11Q709F0 780 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 CAMKMTQ7Z624 323 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 CCDC116Q8IYX3 515 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ZNF321PQ8N8H1 164 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ZSCAN1Q8NBB4 408 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 APCDD1LQ8NCL9 501 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 DOK4Q8TEW6 326 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 PSMF1Q92530 271 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 CTHRC1Q96CG8 243 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 KLHL29Q96CT2 875 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 CATSPER2Q96P56 530 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 TUBB6Q9BUF5 446 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ADAP2Q9NPF8 381 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 PNO1Q9NRX1 252 aaKnown RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ZNF639Q9UID6 485 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ADAM21Q9UKJ8 722 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 G3BP2Q9UN86 482 aaKnown RBP12.49□□□□□ -0.41
PDCD6-201ENST00000264933 ERVK-11Q9UQG0 969 aa12.49□□□□□ -0.41
PDCD6-201ENST00000264933 COL12A1Q99715 3063 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 A0A0G2JND7 137 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 SAGE2PA6NJ88 616 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 SHOX2O60902 331 aaPredicted RBP12.48□□□□□ -0.41
PDCD6-201ENST00000264933 WISP1O95388 367 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 DDAH2O95865 285 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 ATP1B1P05026 303 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 TROVE2P10155 538 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDCD6-201ENST00000264933 LAMP1P11279 417 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 CSNK2A2P19784 350 aaPredicted RBP12.48□□□□□ -0.41
PDCD6-201ENST00000264933 GPX3P22352 226 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 ARFIP2P53365 341 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 SLC26A5P58743 744 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 CHAF1BQ13112 559 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 TERF2Q15554 542 aa12.48□□□□□ -0.41
PDCD6-201ENST00000264933 GSTA3Q16772 222 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms