RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 HOXD10P28358 340 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 SDC2P34741 201 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 GSTM5P46439 218 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 RUNX1T1Q06455 604 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 FCHO2Q0JRZ9 810 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 KCNC3Q14003 757 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ZNF630Q2M218 657 aaPredicted RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 PYDC2Q56P42 97 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ZNF805Q5CZA5 627 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PRAMEF14Q5SWL7 426 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 MPP7Q5T2T1 576 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 AGAP6Q5VW22 663 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PRAMEF13Q5VWM6 474 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ZNF517Q6ZMY9 492 aaPredicted RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 CCDC190Q86UF4 302 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 CPA6Q8N4T0 437 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ANKRD53Q8N9V6 530 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 KLHL6Q8WZ60 621 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 AGAP4Q96P64 663 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 C17orf62Q9BQA9 187 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 CNIH4Q9P003 139 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 NTNG1Q9Y2I2 539 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 A0A1W2PQL4 384 aaPredicted RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 PRAMEF27A3QJZ7 478 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 PITPNM1O00562 1244 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 OR1F1O43749 312 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 KRT75O95678 551 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 H1F0P07305 194 aaKnown RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 HOXB6P17509 224 aaKnown RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 CD72P21854 359 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 SOX18P35713 384 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 WASP42768 502 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 RFX2P48378 723 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 GINS1Q14691 196 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ZNF79Q15937 498 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 SNAPC1Q16533 368 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 PODNL1Q6PEZ8 512 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 TTC23LQ6PF05 361 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 DGLUCYQ7Z3D6 616 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 NXPE3Q969Y0 559 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 REPS1Q96D71 796 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ZG16BQ96DA0 208 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 CRELD1Q96HD1 420 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 TMEM80Q96HE8 168 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 PLA2G12AQ9BZM1 189 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 RNF208Q9H0X6 261 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 RANGRFQ9HD47 186 aaPredicted RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 DYRK4Q9NR20 520 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 CCDC59Q9P031 241 aaKnown RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 REV1Q9UBZ9 1251 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 MOSPD1Q9UJG1 213 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 SCN3AQ9NY46 2000 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 TMPRSS11DO60235 418 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 OSMP13725 252 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ZNF30P17039 623 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ITGB8P26012 769 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 IRS1P35568 1242 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 CRYBB2P43320 205 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 HTR3AP46098 478 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 LBX1P52954 281 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ERVFC1P60507 584 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 RPS25P62851 125 aaKnown RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 HEPACAMQ14CZ8 416 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 GPR19Q15760 415 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ZFP69Q49AA0 526 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 CRB2Q5IJ48 1285 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ZDHHC20Q5W0Z9 365 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 ZNF770Q6IQ21 691 aaPredicted RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 METTL3Q86U44 580 aaKnown RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 MRGPRX3Q96LB0 322 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 LRRC3BQ96PB8 259 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 MAPKAP1Q9BPZ7 522 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 TREX2Q9BQ50 279 aaPredicted RBP8.65□□□□□ -1.02
MSH4-201ENST00000263187 TBC1D17Q9HA65 648 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 THSD1Q9NS62 852 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 SCN2AQ99250 2005 aa8.65□□□□□ -1.02
MSH4-201ENST00000263187 GSAPA4D1B5 854 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 SMLR1H3BR10 107 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 HMGN4O00479 90 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 PDPK1O15530 556 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 UGT2B17O75795 530 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 TBX6O95947 436 aaPredicted RBP8.65□□□□□ -1.03
MSH4-201ENST00000263187 SOD1P00441 154 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 EPHX1P07099 455 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 TSPAN19P0C672 248 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 IL7P13232 177 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 HSD3B1P14060 373 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 HSD3B2P26439 372 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 MMP12P39900 470 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 VIPR2P41587 438 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 SLC6A11P48066 632 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 CCT3P49368 545 aaKnown RBP8.65□□□□□ -1.03
MSH4-201ENST00000263187 RORCP51449 518 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 PCBP3P57721 371 aaKnown RBP8.65□□□□□ -1.03
MSH4-201ENST00000263187 LASP1Q14847 261 aaKnown RBP8.65□□□□□ -1.03
MSH4-201ENST00000263187 FLYWCH1Q4VC44 716 aa8.65□□□□□ -1.03
MSH4-201ENST00000263187 CRTC2Q53ET0 693 aaPredicted RBP8.65□□□□□ -1.03
MSH4-201ENST00000263187 PGBD2Q6P3X8 592 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms