RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CCDC74BQ96LY2 380 aa21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 EFHD1Q9BUP0 239 aa21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 ASPSCR1Q9BZE9 553 aa21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 SYNDIG1Q9H7V2 258 aa21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 ZCCHC3Q9NUD5 404 aaKnown RBP21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 DCAF13Q9NV06 445 aaKnown RBP21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 OLAHQ9NV23 265 aa21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 SERTAD3Q9UJW9 196 aa21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 TMEM184BQ9Y519 407 aaPredicted RBP21.52■■□□□ 1.04
SMARCB1-201ENST00000263121 ZNF749O43361 778 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 LDB3O75112 727 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 LDOC1O95751 146 aaPredicted RBP21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 ZNF806P0C7X5 589 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 PORP16435 677 aaPredicted RBP21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 MAT1AQ00266 395 aaKnown RBP21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 LTB4RQ15722 352 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 TMEM107Q6UX40 140 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 SUMF1Q8NBK3 374 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 ANKRD9Q96BM1 317 aaPredicted RBP21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 ELP4Q96EB1 424 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 GFM1Q96RP9 751 aaKnown RBP21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 PKP2Q99959 881 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 FANCEQ9HB96 536 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 AURKCQ9UQB9 309 aa21.51■■□□□ 1.03
SMARCB1-201ENST00000263121 BLACEA4D250 179 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 DSTNP60981 165 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 EEF1A2Q05639 463 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 TP53BP2Q13625 1128 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 TBCELQ5QJ74 424 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 YOD1Q5VVQ6 348 aaPredicted RBP21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 SLITRK4Q8IW52 837 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 METTL27Q8N6F8 245 aaPredicted RBP21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 HORMAD2Q8N7B1 307 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 PEX11GQ96HA9 241 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 SERHL2Q9H4I8 314 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 SPTBP11277 2137 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 CASQ2O14958 399 aaPredicted RBP21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 EMC8O43402 210 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 FHP07954 510 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 ARAFP10398 606 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 IL10P22301 178 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 ACP1P24666 158 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 MC3RP41968 323 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 MAGEA8P43361 318 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 RPS26P62854 115 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 ID2Q02363 134 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 ACY1Q03154 408 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 SF3A2Q15428 464 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 SYT16Q17RD7 645 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 BHLHB9Q6PI77 547 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 CEACAM20Q6UY09 585 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 TTLL10Q6ZVT0 673 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 RCBTB1Q8NDN9 531 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 OR56A1Q8NGH5 318 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 SLC35G5Q96KT7 338 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 NDC1Q9BTX1 674 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 NTMQ9P121 344 aa21.5■■□□□ 1.03
SMARCB1-201ENST00000263121 D6RAR5 112 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 PLOD2O00469 737 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 CDX4O14627 284 aaPredicted RBP21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 SERPINA1P01009 418 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 ATP1B1P05026 303 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 GP1BAP07359 652 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 PPP2R1BP30154 601 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 KDELR2P33947 212 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 PRIM2P49643 509 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 ARSFP54793 590 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 PRR5P85299 388 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 ZNF630Q2M218 657 aaPredicted RBP21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 PRAMEF17Q5VTA0 474 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 ZNF595Q8IYB9 648 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 EID3Q8N140 333 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 FAM86B1Q8N7N1 296 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 TMEM102Q8N9M5 508 aaPredicted RBP21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 RHBDD1Q8TEB9 315 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 POP5Q969H6 163 aaKnown RBP21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 RBCK1Q9BYM8 510 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 C3orf14Q9HBI5 128 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 MRPS33Q9Y291 106 aaKnown RBP21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 V9GYQ6 96 aa21.49■■□□□ 1.03
SMARCB1-201ENST00000263121 DSCR3O14972 297 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 HNRNPRO43390 633 aaKnown RBP21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 SOX18P35713 384 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 VHLP40337 213 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 SCARB2Q14108 478 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 TNFAIP8L2Q6P589 184 aaPredicted RBP21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 ENPP6Q6UWR7 440 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 TMEM126BQ8IUX1 230 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 ADCY4Q8NFM4 1077 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 OR51Q1Q8NH59 317 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 FBXO30Q8TB52 745 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 LRTOMTQ8WZ04 291 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 KAT2AQ92830 837 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 COL26A1Q96A83 441 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 MAGED4Q96JG8 741 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 A4GALTQ9NPC4 353 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 SIDT1Q9NXL6 827 aaKnown RBP21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 DHCR7Q9UBM7 475 aaKnown RBP21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 HCN4Q9Y3Q4 1203 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 FRYLO94915 3013 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms