RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MON2Q7Z3U7 1717 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 CDK4P11802 303 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 NKPD1Q17RQ9 610 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 SERPINA12Q8IW75 414 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 SAMD14Q8IZD0 417 aaPredicted RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 CIDECQ96AQ7 238 aaPredicted RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 ARMC1Q9NVT9 282 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 CEPT1Q9Y6K0 416 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 PLIN4Q96Q06 1357 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 G3V2L1 256 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 RBMXP38159 391 aaKnown RBP11.54□□□□□ -0.56
SMG6-201ENST00000263073 APOFQ13790 326 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 TLDC1Q6P9B6 456 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 SLC29A4Q7RTT9 530 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 THAP4Q8WY91 577 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 SMARCD2Q92925 531 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 SUSD3Q96L08 255 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 BOCQ9BWV1 1114 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 MCCC2Q9HCC0 563 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 KCNS2Q9ULS6 477 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 TEX13CA0A0J9YWL9 993 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 ZNF254O75437 659 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 ADH5P11766 374 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 PDX1P52945 283 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 ZNF252P-AS1Q0IIN9 211 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 MINDY1Q8N5J2 469 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 NPWQ8N729 165 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 ACDQ96AP0 544 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 FKBP10Q96AY3 582 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 TREX2Q9BQ50 279 aaPredicted RBP11.54□□□□□ -0.56
SMG6-201ENST00000263073 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
SMG6-201ENST00000263073 TYRP14679 529 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 IVDP26440 423 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 TAS2R43P59537 309 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 NFATC4Q14934 902 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 MFSD13AQ14CX5 517 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 TBC1D25Q3MII6 688 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 OR13C3Q8NGS6 347 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 CACNG6Q9BXT2 260 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 CLEC4EQ9ULY5 219 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 OARD1Q9Y530 152 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 MRC1P22897 1456 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 K7ERQ8 282 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 FAAHO00519 579 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 GRID2O43424 1007 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 UPK1BO75841 260 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 ALDOBP05062 364 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 FBXO45P0C2W1 286 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 C1orf220Q5T0J3 134 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 C22orf39Q6P5X5 142 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
SMG6-201ENST00000263073 ZDHHC14Q8IZN3 488 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 ZNF283Q8N7M2 679 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 SMPDL3AQ92484 453 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 KCNJ9Q92806 393 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 TSGA13Q96PP4 275 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 E7ESA3 106 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 GM2AP17900 193 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 MSX1P28360 303 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 GALK2Q01415 458 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 CRYZQ08257 329 aaKnown RBP11.54□□□□□ -0.56
SMG6-201ENST00000263073 TEAD2Q15562 447 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 PRRT3Q5FWE3 981 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 OR52E2Q8NGJ4 325 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 OR6N1Q8NGY5 312 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 FUBP3Q96I24 572 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMG6-201ENST00000263073 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMG6-201ENST00000263073 DHDHQ9UQ10 334 aa11.54□□□□□ -0.56
SMG6-201ENST00000263073 EOMESO95936 686 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 ATP5A1P25705 553 aaKnown RBP11.53□□□□□ -0.56
SMG6-201ENST00000263073 CLRN1P58418 232 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 ERVPABLB-1P60509 514 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 SQSTM1Q13501 440 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 SPCS2Q15005 226 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 CDK10Q15131 360 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 TRMT10AQ8TBZ6 339 aaKnown RBP11.53□□□□□ -0.56
SMG6-201ENST00000263073 RIT1Q92963 219 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 APIPQ96GX9 242 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 SLC30A3Q99726 388 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 KCNK13Q9HB14 408 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 PCDHB11Q9Y5F2 797 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 LOC102723532A0A0G2JNH3 316 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 SCO2O43819 266 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 MAFKO60675 156 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 RPS17P08708 135 aaKnown RBP11.53□□□□□ -0.56
SMG6-201ENST00000263073 ACRV1P26436 265 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 MAPK3P27361 379 aaPredicted RBP11.53□□□□□ -0.56
SMG6-201ENST00000263073 SLAMF1Q13291 335 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 DECR1Q16698 335 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 MEDAGQ5VYS4 303 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 OR56A3Q8NH54 315 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 PAAF1Q9BRP4 392 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 NCR1O76036 304 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 HTR2AP28223 471 aa11.53□□□□□ -0.56
SMG6-201ENST00000263073 CAPZA1P52907 286 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms