RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 RETREG3Q86VR2 466 aa25.85■■□□□ 1.73
SMARCD3-201ENST00000262188 FBXO27Q8NI29 283 aa25.85■■□□□ 1.73
SMARCD3-201ENST00000262188 NSL1Q96IY1 281 aa25.85■■□□□ 1.73
SMARCD3-201ENST00000262188 BTBD9Q96Q07 612 aa25.85■■□□□ 1.73
SMARCD3-201ENST00000262188 RBM38Q9H0Z9 239 aaKnown RBP25.85■■□□□ 1.73
SMARCD3-201ENST00000262188 SLAMF7Q9NQ25 335 aa25.85■■□□□ 1.73
SMARCD3-201ENST00000262188 MAP4K5Q9Y4K4 846 aa25.85■■□□□ 1.73
SMARCD3-201ENST00000262188 CCDC154A6NI56 674 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 S100A3P33764 101 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 C21orf58P58505 322 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 DCDP81605 110 aaKnown RBP25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 PAGE3Q5JUK9 113 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 SLC48A1Q6P1K1 146 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 FAM9CQ8IZT9 166 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 DNAJB14Q8TBM8 379 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 DUSP26Q9BV47 211 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 DDA1Q9BW61 102 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 PIEZO1Q92508 2521 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 C1orf226A1L170 272 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 BOLA2-SMG1P6H3BVE0 249 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 PRMT3O60678 531 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 GUCY1B2O75343 617 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 SPINK2P20155 84 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 ADSLP30566 484 aaPredicted RBP25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 KIR3DL1P43629 444 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 TIPARPQ7Z3E1 657 aaKnown RBP25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 LAPTM4BQ86VI4 370 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 CLECL1Q8IZS7 167 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 TBC1D20Q96BZ9 403 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 RCN3Q96D15 328 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 OR52E6Q96RD3 313 aa25.84■■□□□ 1.73
SMARCD3-201ENST00000262188 SDK2Q58EX2 2172 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 CCDC88CQ9P219 2028 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 TGFBR3LH3BV60 316 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 SLC22A2O15244 555 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 FGF17O60258 216 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 HBQ1P09105 142 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 DRD2P14416 443 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 FEN1P39748 380 aaKnown RBP25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 NDUFA5Q16718 116 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 ZC3H7AQ8IWR0 971 aaKnown RBP25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 GLB1L3Q8NCI6 653 aaPredicted RBP25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 DOK4Q8TEW6 326 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 MR1Q95460 341 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 COQ8BQ96D53 544 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 ASPSCR1Q9BZE9 553 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 CHST8Q9H2A9 424 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 MS4A12Q9NXJ0 267 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 ERVK-11Q9UQG0 969 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 GPC6Q9Y625 555 aaPredicted RBP25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 SPACA6W5XKT8 324 aa25.83■■□□□ 1.73
SMARCD3-201ENST00000262188 CNOT3O75175 753 aaKnown RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 FHP07954 510 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 MAOAP21397 527 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 TLX1P31314 330 aaPredicted RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 FOLH1Q04609 750 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 TLR1Q15399 786 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 MLIPQ5VWP3 458 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 NIPAL1Q6NVV3 410 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 CNRIP1Q96F85 164 aaPredicted RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 COX4I2Q96KJ9 171 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 INPP5KQ9BT40 448 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 MRPS26Q9BYN8 205 aaKnown RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 LANCL2Q9NS86 450 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 SLAMF8Q9P0V8 285 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 TAGLN3Q9UI15 199 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 BMP10O95393 424 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 GSTT2P0CG29 244 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 GSTT2BP0CG30 244 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 GSTM5P46439 218 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 FOXC1Q12948 553 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 REP15Q6BDI9 236 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 R3HCC1LQ7Z5L2 792 aaKnown RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 CACTIN-AS1Q8N1I8 211 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 RP9Q8TA86 221 aaKnown RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 FAM122AQ96E09 287 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 POLR1BQ9H9Y6 1135 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 WDR41Q9HAD4 459 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 IL1RL2Q9HB29 575 aa25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 IFT80Q9P2H3 777 aaPredicted RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 WBP11Q9Y2W2 641 aaKnown RBP25.82■■□□□ 1.72
SMARCD3-201ENST00000262188 AIM2O14862 343 aa25.81■■□□□ 1.72
SMARCD3-201ENST00000262188 SCN2BO60939 215 aa25.81■■□□□ 1.72
SMARCD3-201ENST00000262188 TMED10P49755 219 aaKnown RBP25.81■■□□□ 1.72
SMARCD3-201ENST00000262188 MINDY4Q4G0A6 757 aa25.81■■□□□ 1.72
SMARCD3-201ENST00000262188 FAF1Q9UNN5 650 aaPredicted RBP25.81■■□□□ 1.72
SMARCD3-201ENST00000262188 NUP214P35658 2090 aaPredicted RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 A0A1W2PP18 115 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 IL6P05231 212 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 ZNF12P17014 697 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 TUBA4AP68366 448 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SLC13A2Q13183 592 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 ERI1Q8IV48 349 aaKnown RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 OR8J2Q8NGG1 315 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 ANKRD9Q96BM1 317 aaPredicted RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 CMTM5Q96DZ9 223 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 PRPF18Q99633 342 aaKnown RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 MESP1Q9BRJ9 268 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SLC25A23Q9BV35 468 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SOX17Q9H6I2 414 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms