RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ST13P4Q8IZP2 240 aaPredicted RBP14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 NATD1Q8N6N6 113 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 RP9Q8TA86 221 aaKnown RBP14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 ZBED6CLQ96FA7 236 aaPredicted RBP14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 FAM117AQ9C073 453 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 SERHLQ9NQF3 203 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 ACSS1Q9NUB1 689 aaPredicted RBP14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 ARL8BQ9NVJ2 186 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 PCDHGA6Q9Y5G7 932 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 NCOR2Q9Y618 2525 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 PRSS51A0A1B0GVH4 220 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 DYTNA2CJ06 578 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 TLX3O43711 291 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 ATP1B1P05026 303 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 MPIP34949 423 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 STT3AP46977 705 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 PLIN5Q00G26 463 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 HSPB3Q12988 150 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 CLN3Q13286 438 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 MAPKAPK3Q16644 382 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 PAGE3Q5JUK9 113 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 ANXA8L1Q5VT79 327 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 TMEM205Q6UW68 189 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 ANKRD37Q7Z713 158 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 OR9A2Q8NGT5 310 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 DOK4Q8TEW6 326 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 METTL21AQ8WXB1 218 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 FGF11Q92914 225 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 GPN2Q9H9Y4 310 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 SEMA3GQ9NS98 782 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 KCND3Q9UK17 655 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 NDUFAF1Q9Y375 327 aa14.79□□□□□ -0.04
CCDC90B-201ENST00000260054 FRYQ5TBA9 3013 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 CCT8L1PA6NM43 557 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 OR10H2O60403 315 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 CBX6O95503 412 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 IFNA16P05015 189 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 LIFP15018 202 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 PRDX6P30041 224 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 SOX18P35713 384 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 CDKN2CP42773 168 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 MANFP55145 182 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 HBA1P69905 142 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 SRSF6Q13247 344 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 KRT72Q14CN4 511 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 MLC1Q15049 377 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 C6orf89Q6UWU4 347 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 MSANTD1Q6ZTZ1 278 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 VASH2Q86V25 355 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 VPS37AQ8NEZ2 397 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 ADCY4Q8NFM4 1077 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 GTF2H4Q92759 462 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 GATA6Q92908 595 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 KIAA1143Q96AT1 154 aaPredicted RBP14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 C8orf44Q96CB5 159 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 CMTM5Q96DZ9 223 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 RBM18Q96H35 190 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 NAF1Q96HR8 494 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 CCDC115Q96NT0 180 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 DGAT2Q96PD7 388 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 INPP5KQ9BT40 448 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 PNO1Q9NRX1 252 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 WDR70Q9NW82 654 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 BTNL2Q9UIR0 455 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 ANGPTL2Q9UKU9 493 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 HS3ST3B1Q9Y662 390 aa14.78□□□□□ -0.04
CCDC90B-201ENST00000260054 IGHV3-20A0A0C4DH32 117 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 A8MUA0 341 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 ANGPT2O15123 496 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 CPSF4O95639 269 aaKnown RBP14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 ABCB1P08183 1280 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 NT5EP21589 574 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 MMP11P24347 488 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 CDK9P50750 372 aaKnown RBP14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 BIKQ13323 160 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 IL10RAQ13651 578 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 PRICKLE4Q2TBC4 344 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 REP15Q6BDI9 236 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 ZFP28Q8NHY6 868 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 PTPMT1Q8WUK0 201 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 OR5P2Q8WZ92 322 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 NPAS2Q99743 824 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 TMEM121BQ9BXQ6 578 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 TRIM4Q9C037 500 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 RMND5AQ9H871 391 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 SIRT3Q9NTG7 399 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 SLAMF8Q9P0V8 285 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 MAP10Q9P2G4 905 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 TAGLN3Q9UI15 199 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 LEF1Q9UJU2 399 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 MAN2B2Q9Y2E5 1009 aa14.77□□□□□ -0.04
CCDC90B-201ENST00000260054 LOC102723996A0A087X1L8 192 aa14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 MED19A0JLT2 244 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 BBIP1A8MTZ0 92 aa14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 UBOX5O94941 541 aa14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 CT62P0C5K7 136 aa14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 CPA2P48052 419 aa14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 OR4D2P58180 307 aa14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 MRPS35P82673 323 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-201ENST00000260054 MGAT2Q10469 447 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms